Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 1236 a.a., methionine synthase from Pseudomonas simiae WCS417

 Score = 1575 bits (4078), Expect = 0.0
 Identities = 796/1228 (64%), Positives = 963/1228 (78%), Gaps = 14/1228 (1%)

Query: 7    QQLEQQLKQRILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQIIK 66
            Q L Q LK+RIL++DGGMGTMIQSYKL+E DYRG RF DW  D+KGNNDLLV+T+P +I 
Sbjct: 9    QALHQALKERILILDGGMGTMIQSYKLEENDYRGKRFADWPSDVKGNNDLLVITRPDVIG 68

Query: 67   EIHSAYLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDPSR 126
             I  AYL+AGADILETNTFN+T I+MADY M++L+ E+N   A+LAR++AD  TA+ P +
Sbjct: 69   GIEKAYLDAGADILETNTFNATRISMADYGMEALAFELNVEGARLARKIADAKTAETPDK 128

Query: 127  PRYVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIFD 186
            PR+VAGVLGPT+RTCS+SPDVN+PG+RNVTFD LVE Y+E+T+ LI+GG+DLILIETIFD
Sbjct: 129  PRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADLILIETIFD 188

Query: 187  TLNAKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPISFGL 246
            TLNAKA  FAV  VFEEL I LP+MISGTITDASGRTLSGQTTEAF+N++ H +PIS GL
Sbjct: 189  TLNAKAAIFAVQGVFEELNIELPIMISGTITDASGRTLSGQTTEAFWNSVAHAKPISVGL 248

Query: 247  NCALGPDELRQYVEELSRISECYVSAHPNAGLPNAFGEYDLSAEEMAEHIAEWAQAGFLN 306
            NCALG  ELR Y+EELS  +  +VSAHPNAGLPN FGEYD    + A+ I E+AQ+GFLN
Sbjct: 249  NCALGASELRPYLEELSNKANTHVSAHPNAGLPNEFGEYDELPSQTAKVIEEFAQSGFLN 308

Query: 307  LVGGCCGTTPEHIAAIAKAVEGVKPRALPDLKVECRLSGLEPLNIGPETLFVNVGERTNV 366
            +VGGCCGTTP HI AIAKAV G  PR +PD+   CRLSGLEP  I   +LFVNVGERTN+
Sbjct: 309  IVGGCCGTTPGHIEAIAKAVAGYAPRQIPDIPKACRLSGLEPFTIDRSSLFVNVGERTNI 368

Query: 367  TGSARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLCASEPE 426
            TGSA+F RLI+E+ Y EAL+VA +QVE GAQ+IDINMDEGMLD++  MV FLNL A EP+
Sbjct: 369  TGSAKFARLIREDNYTEALEVALQQVEAGAQVIDINMDEGMLDSKKAMVTFLNLIAGEPD 428

Query: 427  ISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAVIVMAF 486
            IS+VP+M+DSSKW+VIEAGLKCIQGKGIVNSIS+KEG E+FI  AKL +RYGAAV+VMAF
Sbjct: 429  ISRVPIMIDSSKWDVIEAGLKCIQGKGIVNSISMKEGVEQFIHHAKLCKRYGAAVVVMAF 488

Query: 487  DEVGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYALDFINA 546
            DE GQADT  RK EIC+R+Y ILV+EVGFPPEDIIFDPNIFAVATGI+EHNNYA+DFINA
Sbjct: 489  DEAGQADTEARKKEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFINA 548

Query: 547  VADIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNAGQLEIY 606
             A I+ ELP+A+ SGGVSNVSFSFRGNN VREAIH+VFL +  ++G+ MGIVNAGQLEIY
Sbjct: 549  CAYIRDELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLYAIRNGLTMGIVNAGQLEIY 608

Query: 607  DNVPLKLREAVEDVILNRRSDGTERLLEIAEAYRENSVGKEEDASALEWRAWPVAKRLEH 666
            D +P +LR+AVEDV+LNR  DGT+ LL IA+ Y+ +  G  ++A   EWR W V KRLEH
Sbjct: 609  DQIPAELRDAVEDVVLNRTPDGTDALLAIADKYKGD--GSVKEAETEEWRGWDVNKRLEH 666

Query: 667  ALVKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVM 726
            ALVKGIT  IV+DTEE+R   ++P+EVIEGPLM GMN+VGDLFG GKMFLPQVVKSARVM
Sbjct: 667  ALVKGITTHIVEDTEESRLSFARPIEVIEGPLMSGMNIVGDLFGAGKMFLPQVVKSARVM 726

Query: 727  KQAVAYLEPFINAQKSGS-TSNGKILLATVKGDVHDIGKNIVGVVLQCNNFEIIDLGVMV 785
            KQAVA+L PFI  +K     + GKIL+ATVKGDVHDIGKNIVGVVL CN ++I+DLGVMV
Sbjct: 727  KQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMV 786

Query: 786  PCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGATTSKAHTAV 845
            P E+IL+VA+EQ  DIIGLSGLITPSLDEMVHVA+EM+RQ F LPL+IGGATTSKAHTAV
Sbjct: 787  PAEKILQVAKEQKCDIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTSKAHTAV 846

Query: 846  KIEQNY-HAPVVYVNNASRAVGVCTSLLSDEQRPGFIERLDLDYERTRDQHARKTPKSRP 904
            KIE  Y +  VVYV +ASRAVGV T LLS E + GF+ER   +Y   R++ + ++ ++  
Sbjct: 847  KIEPKYSNDAVVYVTDASRAVGVATQLLSKELKAGFVERTREEYVEVRERTSNRSARTER 906

Query: 905  VTLEQARANKAALDWANYTPPAPAKPGVHVFENIALATLRPYIDWTPFFMTWSLMGKYPA 964
            ++   A A K   DW+ Y+P  P   G  V +NI L  L  YIDWTPFF++W L GK+P 
Sbjct: 907  LSYPAAIAKKPQFDWSTYSPVVPTFTGAKVLDNIDLKVLAEYIDWTPFFISWDLAGKFPR 966

Query: 965  ILEHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASV-GDDIEVYSDESRTQ 1023
            IL  E VGE A  L+ DA  +L K+  E L+ A  +   +P   V  DD+EVY D+   Q
Sbjct: 967  ILTDEVVGEAATALYADAQEMLKKLIDEKLISARAVFGFWPTNQVQDDDLEVYGDDG--Q 1024

Query: 1024 VAHVLYNLRQQTEKPKG-ANYCLSDYVAPKESGKRDWIGAFAVTGGIGERALADAYKAQG 1082
                L++LRQQ  K  G  N+ L+D+VAPK+SG  D+IG F  T GIG   +A AY+  G
Sbjct: 1025 PIAKLHHLRQQIIKTDGKPNFSLADFVAPKDSGVTDYIGGFITTAGIGAEEVAKAYQDAG 1084

Query: 1083 DDYNAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLIRERYQGIRPAPGYP 1142
            DDYN+IM++A+ADRLAEA AE+LH++VRKE WGYA DE L N+ LI+E+Y GIRPAPGYP
Sbjct: 1085 DDYNSIMVKALADRLAEACAEWLHQQVRKEHWGYAKDEQLDNEALIKEQYSGIRPAPGYP 1144

Query: 1143 ACPEHTEKATLWQMLNVEE------TIGMSLTTSYAMWPGASVSGWYFSHPDSRYFAVAQ 1196
            ACP+HTEKA L+Q+L+ E         G+ LT  YAM+P A+VSGWYF+HP ++YFAV +
Sbjct: 1145 ACPDHTEKAQLFQLLDPEAREMHAGRSGVFLTEHYAMFPAAAVSGWYFAHPQAQYFAVGK 1204

Query: 1197 IQPDQLHSYAERKGWRLEEAEKWLAPNL 1224
            +  DQ+ SY  RKG  L   E+WLAPNL
Sbjct: 1205 VDKDQVASYTARKGQDLSVTERWLAPNL 1232