Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 923 a.a., 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), C-terminal domain from Variovorax sp. SCN45

 Score = 1048 bits (2711), Expect = 0.0
 Identities = 556/929 (59%), Positives = 683/929 (73%), Gaps = 38/929 (4%)

Query: 323  AKAVEGVKPRALPDLKVECRLSGLEPLNIGPETLFVNVGERTNVTGSARFKRLIKEEQYD 382
            A A     P A P +K    LSGLEP+ IG  TLFVN+GERTNVTGS  F R+I   Q++
Sbjct: 6    APATPDSAPLAPPPMK----LSGLEPVAIGEGTLFVNIGERTNVTGSKAFARMILNGQFE 61

Query: 383  EALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLCASEPEISKVPVMVDSSKWEVI 442
            EAL VAR+QVENGAQ+IDINMDE MLD++  MVRFLNL ASEP+I++VPVMVDSSKW+VI
Sbjct: 62   EALAVARQQVENGAQVIDINMDEAMLDSKVAMVRFLNLIASEPDIARVPVMVDSSKWDVI 121

Query: 443  EAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAVIVMAFDEVGQADTRERKLEIC 502
            EAGL+CIQGKGIVNSIS+KEG +KF  +AKLV+RYGAA +VMAFDE GQADT  RK+EIC
Sbjct: 122  EAGLRCIQGKGIVNSISMKEGVDKFKHEAKLVKRYGAAAVVMAFDEKGQADTYARKIEIC 181

Query: 503  RRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYALDFINAVADIKRELPHAMISGG 562
             RAY ILVDEVGFPPEDIIFDPNIFA+ATGI+EH+NYA+DFI AV  IK+ LP A +SGG
Sbjct: 182  ERAYRILVDEVGFPPEDIIFDPNIFAIATGIEEHDNYAVDFIEAVRWIKQNLPGAKVSGG 241

Query: 563  VSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNAGQLEIYDNVPLKLREAVEDVIL 622
            VSNVSFSFRGN+ +REAIH VFLYH  + GMDMGIVNAG + +YD++   LRE VEDV+L
Sbjct: 242  VSNVSFSFRGNDPMREAIHTVFLYHAIQAGMDMGIVNAGMVGVYDDLEPALRERVEDVVL 301

Query: 623  NRRSDGTERLLEIAEAYRENSVGKEEDASALEWRAWP-----VAKRLEHALVKGITEFIV 677
            NRR D  ERL+E+AE  +    G ++++  LEWR  P     V +RL HA+V GIT+FIV
Sbjct: 302  NRRPDAGERLVEVAETAKS---GAKDESKRLEWRGTPEQPVHVNQRLSHAMVHGITDFIV 358

Query: 678  QDTEEARQQ----ASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAYL 733
            +DTEEA QQ      +PL VIEGPLMDGMN+VGDLFG GKMFLPQVVKSARVMK AVA+L
Sbjct: 359  EDTEEAYQQILATGGRPLHVIEGPLMDGMNIVGDLFGAGKMFLPQVVKSARVMKSAVAHL 418

Query: 734  EPFINAQK-------SGSTSNGKILLATVKGDVHDIGKNIVGVVLQCNNFEIIDLGVMVP 786
             P+I  +K           + GKI++ATVKGDVHDIGKNIV VVLQCNNFE++++GVMVP
Sbjct: 419  LPYIEEEKLRDEAAGRDVRTKGKIIIATVKGDVHDIGKNIVTVVLQCNNFEVVNMGVMVP 478

Query: 787  CEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGF----ELPLLIGGATTSKAH 842
            C +IL  A+ +  DI+GLSGLITPSL+EM +VA EM+R       ++PL+IGGATTS+ H
Sbjct: 479  CHEILARAKVEGADIVGLSGLITPSLEEMQYVAGEMQRDDHFRIKKIPLMIGGATTSRVH 538

Query: 843  TAVKIEQNYHAPVVYVNNASRAVGVCTSLLSDEQRPGFIERLDLDYERTRDQHARKTPKS 902
            TAVKI  +Y  PVVYV +ASR+V V  SLLSD Q   +I+ ++ DYE+ R QHA K  K 
Sbjct: 539  TAVKIAPHYEGPVVYVPDASRSVSVAQSLLSD-QATAYIDEINADYEKVRTQHANK--KQ 595

Query: 903  RPV-TLEQARANKAALDWANYTPPAPAKPGVHVFENIALATLRPYIDWTPFFMTWSLMGK 961
             P+  L + RANK  +DW+NYTPP P   G  VF N  L  L  YIDW PFF TW L G 
Sbjct: 596  VPLWPLAKVRANKTPIDWSNYTPPCPKFIGRRVFRNFDLTELAKYIDWGPFFQTWDLAGP 655

Query: 962  YPAILEHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASVG-DDIEVYSDES 1020
            +PAIL+ E VG EA R++ D   +L ++     L ASG+   +PA +V  DDIE+Y+DE+
Sbjct: 656  FPAILKDEIVGTEAVRVYADGQRMLKRLIEGRWLSASGIVGFWPANTVNDDDIELYTDET 715

Query: 1021 RTQVAHVLYNLRQQTEKP-----KGANYCLSDYVAPKESGKRDWIGAFAVTGGIGERALA 1075
            R++VA   Y +RQQTEK         + CL+D+VAPK SG +D++G FAVT G+G     
Sbjct: 716  RSEVALTWYGMRQQTEKQVIDGVMRPSRCLADFVAPKASGLKDYVGMFAVTAGLGVEKKE 775

Query: 1076 DAYKAQGDDYNAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLIRERYQGI 1135
              +    DDY+AIM++A+ADRLAEAFAE LH + R ++WGYASDENLSNDD+I E+Y+GI
Sbjct: 776  KYFIDDLDDYSAIMLKALADRLAEAFAESLHHRARTDLWGYASDENLSNDDMIGEKYRGI 835

Query: 1136 RPAPGYPACPEHTEKATLWQMLNVEETIGMSLTTSYAMWPGASVSGWYFSHPDSRYFAVA 1195
            RPAPGYPACP+H+ K  ++ +L   + IGM+LT S AM P ASVSG+Y SHPDS YF V 
Sbjct: 836  RPAPGYPACPDHSVKRPMFDLLGCAD-IGMTLTESLAMMPAASVSGFYLSHPDSTYFNVG 894

Query: 1196 QIQPDQLHSYAERKGWRLEEAEKWLAPNL 1224
            +I  DQL   A R+    +  E+ LAPNL
Sbjct: 895  KIGHDQLQDQAARRKESEDYLERLLAPNL 923