Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 867 a.a., 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), C-terminal domain from Sphingobium sp. HT1-2

 Score =  984 bits (2543), Expect = 0.0
 Identities = 512/871 (58%), Positives = 639/871 (73%), Gaps = 15/871 (1%)

Query: 357  FVNVGERTNVTGSARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVR 416
            FVN+GERTNVTGSA+FK+LI    Y  A+D+AREQVENGAQI+D+NMDEG+LDA   M  
Sbjct: 10   FVNIGERTNVTGSAKFKKLIMAGDYAAAIDIAREQVENGAQIVDVNMDEGLLDAVEAMTT 69

Query: 417  FLNLCASEPEISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRR 476
            FL L  +EP+IS+VPVM+DSSKWEVIEAGLKC+ GK +VNSIS+KEG+E F+  AKL   
Sbjct: 70   FLKLMTAEPDISRVPVMIDSSKWEVIEAGLKCVSGKPVVNSISMKEGEEAFLHHAKLCMA 129

Query: 477  YGAAVIVMAFDEVGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEH 536
            YGAAV+VMAFDE GQADT+ RK+EIC RAY +L+  +GFPPEDIIFDPNIFAVATGI+EH
Sbjct: 130  YGAAVVVMAFDETGQADTQARKVEICERAYKLLM-TIGFPPEDIIFDPNIFAVATGIEEH 188

Query: 537  NNYALDFINAVADIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMG 596
            NNY +DFI A  +IK+  PH  ISGG+SN SFSFRGN  VR A+H+VFLYH    G+DM 
Sbjct: 189  NNYGVDFIEACREIKKRCPHVHISGGLSNFSFSFRGNEPVRRAMHSVFLYHAIPAGLDMA 248

Query: 597  IVNAGQLEIYDNVPLKLREAVEDVILNRRSDGTERLLEIAEAYRENSVGKEEDASALEWR 656
            IVNAGQL++YD +   LR+A EDV+LN   +  +RL+ +AE+++      E+  +A EWR
Sbjct: 249  IVNAGQLDVYDAIDPALRQACEDVLLNSDPEAGDRLVALAESFKGKDAASEK--AAQEWR 306

Query: 657  AWPVAKRLEHALVKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFL 716
             WPVAKRLEHALVKGI  ++V+DTEE R  A KP++VIEGPLMDGMNVVGDLFG GKMFL
Sbjct: 307  GWPVAKRLEHALVKGIDMYVVEDTEECRLAAEKPIQVIEGPLMDGMNVVGDLFGAGKMFL 366

Query: 717  PQVVKSARVMKQAVAYLEPFINAQKS-GSTSNGKILLATVKGDVHDIGKNIVGVVLQCNN 775
            PQVVKSARVMK+AVA+L P+I A K  G+   GKI++ATVKGDVHDIGKNIVGVVLQCN 
Sbjct: 367  PQVVKSARVMKKAVAHLLPYIEAAKEPGAKGKGKIIMATVKGDVHDIGKNIVGVVLQCNG 426

Query: 776  FEIIDLGVMVPCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGG 835
            FE+ID+GVMVP + I+K A E + D+IGLSGLITPSLDEMV VA EM+R    +PLLIGG
Sbjct: 427  FEVIDMGVMVPWQDIIKAANENDADMIGLSGLITPSLDEMVTVAAEMQRANMTMPLLIGG 486

Query: 836  ATTSKAHTAVKIEQNYHAPVVYVNNASRAVGVCTSLLSDEQRPGFIERLDLDYERTRDQH 895
            ATTS+ HTA++I+  +  PVV+V +ASRAVGV T+L+S+ Q+  F+++   DYE  R   
Sbjct: 487  ATTSRVHTALRIDPAFTGPVVHVLDASRAVGVATALVSETQKADFVQKTKDDYEHVRVAR 546

Query: 896  ARKTPKSRPVTLEQARANKAALDWANYTPPAPAKPGVHVFENIALATLRPYIDWTPFFMT 955
            A K  +S+ ++LE ARAN   +D  +   P P  PG H F +  L  L  YIDWTPFF  
Sbjct: 547  ANK-GQSQLLSLEDARANAFEMD-ESLKAPRPLLPGTHRFPDWDLKDLVNYIDWTPFFRA 604

Query: 956  WSLMGKYPAILEHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASVGDDIEV 1015
            W L G YPAILE E VGE A+ LF DA  +L K+  E  L A G+  L+P    GDDI V
Sbjct: 605  WELAGNYPAILEDEIVGESARSLFADAQKMLAKIIDEKWLTARGVAGLWPCRRQGDDIIV 664

Query: 1016 YSDESRTQVAHVLYNLRQQTEKPKG-ANYCLSDYVAPKESGKRDWIGAFAVTGGIGERAL 1074
            + ++ +    + L  LRQQ  K +G AN CL+D++    S   DW+G FAV+    E  L
Sbjct: 665  HVEDEK---HYTLPMLRQQIAKREGRANMCLADFI----SHDGDWMGGFAVSIHGIEPHL 717

Query: 1075 ADAYKAQGDDYNAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLIRERYQG 1134
            A  +K   DDY+ I+++A+ADRLAEAFAE LH  VR  +WGYA  E L+N+ LI+E Y+G
Sbjct: 718  A-RFKNAIDDYSDILLKALADRLAEAFAERLHHYVRTALWGYAEGEQLTNEALIKEEYRG 776

Query: 1135 IRPAPGYPACPEHTEKATLWQMLNVEETIGMSLTTSYAMWPGASVSGWYFSHPDSRYFAV 1194
            IRPAPGYPACPEH+ K  L++ML+     G +LT S+AM P A+VSG+YF H  + YF V
Sbjct: 777  IRPAPGYPACPEHSLKPILFEMLDAHHATGATLTESFAMLPTAAVSGFYFGHQQAEYFGV 836

Query: 1195 AQIQPDQLHSYAERKGWRLEEAEKWLAPNLD 1225
            A++  DQL  YA+R+G  LE AE++L PNLD
Sbjct: 837  ARVGRDQLEDYAQRRGIDLETAERYLRPNLD 867