Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 1157 a.a., methionine synthase from Magnetospirillum magneticum AMB-1

 Score =  541 bits (1394), Expect = e-157
 Identities = 374/1214 (30%), Positives = 617/1214 (50%), Gaps = 96/1214 (7%)

Query: 13   LKQRILLIDGGMGTMIQSYKLQ-EEDYRGARFVDWHCDLKGNNDLLVLTQPQIIKEIHSA 71
            L + +LL DGG G ++Q+  L  E+D++G         L+   ++LV ++P +I+ IH+ 
Sbjct: 8    LSRHVLLCDGGTGALVQAMNLSVEKDFQG---------LENCTEILVKSRPDVIRGIHAR 58

Query: 72   YLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDPSRPRYVA 131
            Y EAGAD++E +TF ++ I +A++ +   + E+N AA +LA E A+++  K   R R+V 
Sbjct: 59   YFEAGADMVEADTFGASPITLAEFGIAERAHELNQAAIELAWEAAEQF--KGDGRTRFVL 116

Query: 132  GVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIFDTLNAK 191
            G +GP  +          P   ++ +D L  AY       I GG    L+ET  D L  K
Sbjct: 117  GAIGPGTKL---------PSLGHIGYDELEAAYVIQAAGQIAGGVSAFLVETCQDPLQIK 167

Query: 192  ACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPISFGLNCALG 251
            A            G  +PV +  T+ + +G  L G    A    ++ +     GLNCA G
Sbjct: 168  AAVNGCKIANAAAGTDVPVFVQVTV-ETTGTLLVGADIAAAATVVQSLGVPLMGLNCAAG 226

Query: 252  PDELRQYVEELSRISECYVSAHPNAGLPNAFG---EYDLSAEEMAEHIAEWAQAGFLNLV 308
            P E+ ++ + L      +VS  PNAGLP        Y L   E+A     +  AG  NL+
Sbjct: 227  PQEMGEHFKWLIDNWTGFVSIQPNAGLPELVDGQTRYPLLPAELAVWHERFVSAG-ANLL 285

Query: 309  GGCCGTTPEHIAAIAKAVE----GVKP----RALPDLKVECRLSGLEPLNIGPETLFVNV 360
            GGCCGTTP HI+A  + ++    G +P    R++  +     L    PL    E  F+++
Sbjct: 286  GGCCGTTPPHISATNEMLKRIGNGYRPNPVKRSVHWVPSVASLYTQVPLR--QENAFLSI 343

Query: 361  GERTNVTGSARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNL 420
            GER N  GS +F+ L   E +D    +AREQV+ G+  +D+       +  A M   ++ 
Sbjct: 344  GERCNANGSKKFRDLQDAEDWDGITAIAREQVKEGSHTLDVCTAFVGRNEVADMTEVVSR 403

Query: 421  CASEPEISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAA 480
                      P+++DS++  V+EAGLK   GK I+NSI+ + G++    +  L R++GAA
Sbjct: 404  LRGAVT---TPLVIDSTELPVLEAGLKLYGGKAILNSINFENGEKDAADRLVLARKFGAA 460

Query: 481  VIVMAFDEVGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYA 540
            V+ +  DE G A     KL I +R Y   V + G P  D++FDP  F + TG ++    A
Sbjct: 461  VVALTIDEDGMAKDAAAKLRIAKRLYDFAVTKHGLPASDLLFDPLTFTICTGNEDDRKLA 520

Query: 541  LDFINAVADIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNA 600
            ++ ++A+  I RE+P   I  G+SNVSF  +     R+ +++VF+ H  K GM   IV+ 
Sbjct: 521  VETLDAIEMITREMPECGIVLGLSNVSFGLK--PAARQVLNSVFIDHAIKRGMTGAIVHV 578

Query: 601  GQLEIYDNVPLKLREAVEDVILNRRSDGTERLLEIAEAYRENSVGKEEDASALEWRAWPV 660
             ++     +P +  +A ED+I +R      R + +    +   + KE  A A +      
Sbjct: 579  SKIVPLHTLPEEEVKAAEDLIYDRDPQALSRYIALFGDRKAAEIKKERPAKAED------ 632

Query: 661  AKRLEHALVKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVV 720
              RL+  ++ G    +  D  +  ++  KPL++I   L+DGM VVG+LFG GKM LP V+
Sbjct: 633  --RLKQRIIDGDRTGLEDDLAQVMEEGWKPLDIINTLLLDGMKVVGELFGSGKMQLPFVL 690

Query: 721  KSARVMKQAVAYLEPFINAQKSGSTSNGKILLATVKGDVHDIGKNIVGVVLQCNNFEIID 780
            +SA  MK +VA+LEP  + +K+       ++LATVKGDVHDIGKN+V ++L  N +++I+
Sbjct: 691  QSAETMKASVAFLEP--HMEKADGQQKATMVLATVKGDVHDIGKNLVDIILTNNGYKVIN 748

Query: 781  LGVMVPCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGATTSK 840
            +G+  P  +I+K A+E   D +G+SGL+  S   M    +EM   G ++P+L+GGA  ++
Sbjct: 749  IGIKQPVAEIIKAAKEHKADAVGMSGLLVKSTVIMRENLEEMTNAGLDVPVLLGGAALTR 808

Query: 841  AHTAVKIEQNY-HAPVVYVNNASRAVGVCTSL------------LSDEQRPGFIERLDLD 887
             +      + Y    V Y  +A   + +   +             +   RPG        
Sbjct: 809  KYVEEDCSKAYGSGRVAYARDAFDGLDLMAKVADGSFDAHVAAKAASPHRPG-------S 861

Query: 888  YERTRDQHARKTPKSRPVTLEQARANKAALDWANYTPPAPAKP--GVHVFENIALATLRP 945
              RT  + A+  P +RPV  ++    +A L   +   PAP  P  G  V E+  L  L P
Sbjct: 862  PSRTLGEAAQ--PATRPVDWDEINLRRAEL---HKDVPAPVPPFWGARVIESAPLQNLIP 916

Query: 946  YIDWTPFF-MTWSLMGKYPAILEHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALF 1004
            +++ T  +   W    +  +I E +      K +   A  +L +  +E +L+   +   +
Sbjct: 917  FLNETMLYQFHWGYRKQGKSIEEFKAWAH--KEIRPVAMDMLKRCAKEEILRPQAVYGYW 974

Query: 1005 PAASVGDDIEVYSDESRTQVAHVLYNLRQQTEKPKGANYCLSDYVAPKESGKRDWIGAFA 1064
             AAS  D + +++++  T+VA   +       + K    C++D+  P     RD IG   
Sbjct: 975  KAASDNDSVVLFAEDGTTEVARFPF-----PRQAKDGGLCIADFFRPVSDPVRDVIGLQV 1029

Query: 1065 VTGGIGERA---LADAYKAQGDDY-NAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDE 1120
            VT  +G+RA     D +KA  D Y + + +  ++  +AEA AEY+H+++R E+ G+A+++
Sbjct: 1030 VT--MGKRATEVAQDWFKA--DKYQDYLYLHGLSVEMAEAMAEYVHKRIRSEL-GFAAED 1084

Query: 1121 NLSNDDLIRERYQGIRPAPGYPACPEHTEKATLWQMLNVEETIGMSLTTSYAMWPGASVS 1180
                D L+++ Y+G R + GYPACP   ++  L  +L  E  IG++L+  + + P  S S
Sbjct: 1085 AADMDRLLKQNYRGSRFSFGYPACPRIEDQTQLLSLLGAER-IGVTLSEEFQLEPEQSTS 1143

Query: 1181 GWYFSHPDSRYFAV 1194
                 HP ++YF+V
Sbjct: 1144 AIVTVHPQAKYFSV 1157