Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 1257 a.a., methionine synthase from Agrobacterium fabrum C58

 Score = 1449 bits (3751), Expect = 0.0
 Identities = 732/1231 (59%), Positives = 912/1231 (74%), Gaps = 9/1231 (0%)

Query: 2    GKEVRQQLEQQLKQRILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQ 61
            G E+ + L     +RIL++DG MGT IQ     E+ +RG RF+   C  KGNNDLL+LTQ
Sbjct: 15   GAEIFKALRDAASERILILDGAMGTQIQGLGFDEDHFRGDRFIGCACHQKGNNDLLILTQ 74

Query: 62   PQIIKEIHSAYLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTA 121
            P  I+EIH  Y  AGADILETNTF+ST IA ADY+M++   ++N   A + R  A     
Sbjct: 75   PDAIEEIHYRYAMAGADILETNTFSSTRIAQADYEMENAVYDLNREGAAIVRRAAQRAER 134

Query: 122  KDPSRPRYVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILI 181
            +D  R R+VAG +GPTNRT SISPDVN+PG+R V+FD L  AY E    LI GG+D+ILI
Sbjct: 135  ED-GRRRFVAGAIGPTNRTASISPDVNNPGYRAVSFDDLRIAYGEQIDGLIDGGADIILI 193

Query: 182  ETIFDTLNAKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRP 241
            ETIFDTLNAKA  FA +  FE  GI LPVMISGTITD SGRTLSGQT  AF+N++RH  P
Sbjct: 194  ETIFDTLNAKAAIFACEERFEAKGIRLPVMISGTITDLSGRTLSGQTPSAFWNSVRHANP 253

Query: 242  ISFGLNCALGPDELRQYVEELSRISECYVSAHPNAGLPNAFGEYDLSAEEMAEHIAEWAQ 301
             + GLNCALG D +R +++ELS +++ +V A+PNAGLPN FG+YD + E MA  +  + +
Sbjct: 254  FTIGLNCALGADAMRPHLQELSDVADTFVCAYPNAGLPNEFGQYDETPEMMARQVEGFVR 313

Query: 302  AGFLNLVGGCCGTTPEHIAAIAKAVEGVKPRALPDLKVECRLSGLEPLNIGPETLFVNVG 361
             G +N+VGGCCG+TPEHI AIA+AV+  KPR +P+ K    LSGLEP  +  +  FVNVG
Sbjct: 314  DGLVNIVGGCCGSTPEHIRAIAEAVKDYKPREIPEHKPFMSLSGLEPFVLTKDIPFVNVG 373

Query: 362  ERTNVTGSARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLC 421
            ERTNVTGSARF++LI    Y  AL VAR+QVENGAQIIDINMDEG++D+E  MV FLNL 
Sbjct: 374  ERTNVTGSARFRKLITAGDYTAALAVARDQVENGAQIIDINMDEGLIDSEKAMVEFLNLI 433

Query: 422  ASEPEISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAV 481
            A+EP+I++VPVM+DSSK+E+IEAGLKC+QGK IVNSISLKEG+EKF+ QA+LV  YGAAV
Sbjct: 434  AAEPDIARVPVMIDSSKFEIIEAGLKCVQGKSIVNSISLKEGEEKFLQQARLVHNYGAAV 493

Query: 482  IVMAFDEVGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYAL 541
            +VMAFDEVGQADT +RK+EIC RAY +L ++ G  PEDIIFDPN+FAVATGI+EHNNY +
Sbjct: 494  VVMAFDEVGQADTYQRKVEICARAYKLLTEKAGLSPEDIIFDPNVFAVATGIEEHNNYGV 553

Query: 542  DFINAVADIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNAG 601
            DFI A   I+  +P   ISGGVSN+SFSFRGN  VREA+HAVFLYH  + GMDMGIVNAG
Sbjct: 554  DFIEATKTIRETMPLTHISGGVSNLSFSFRGNEPVREAMHAVFLYHAIQVGMDMGIVNAG 613

Query: 602  QLEIYDNVPLKLREAVEDVILNRRSDGTERLLEIAEAYRENSVGKEEDASALEWRAWPVA 661
            QL +YDN+  +LREA EDV+LNRR D TERLLE+AE +R  +  K+     L WR +PV 
Sbjct: 614  QLAVYDNIDAELREACEDVVLNRRDDATERLLEVAERFR-GTGEKQAKVQDLSWREYPVE 672

Query: 662  KRLEHALVKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVVK 721
            KRLEHALV GIT++I  DTEEARQQA++PL VIEGPLM GMNVVGDLFG GKMFLPQVVK
Sbjct: 673  KRLEHALVNGITDYIEADTEEARQQAARPLHVIEGPLMAGMNVVGDLFGSGKMFLPQVVK 732

Query: 722  SARVMKQAVAYLEPFINAQK-----SGSTSNGKILLATVKGDVHDIGKNIVGVVLQCNNF 776
            SARVMKQAVA L P++  +K     S  ++ GK+L+ATVKGDVHDIGKNIVGVVL CNN+
Sbjct: 733  SARVMKQAVAVLLPYMEEEKRLNGGSERSAAGKVLMATVKGDVHDIGKNIVGVVLACNNY 792

Query: 777  EIIDLGVMVPCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGA 836
            EIIDLGVMVP  +IL+ A  + VD+IGLSGLITPSLDEMVHVA EMERQGF++PLLIGGA
Sbjct: 793  EIIDLGVMVPTTKILETAIAEKVDVIGLSGLITPSLDEMVHVAAEMERQGFDIPLLIGGA 852

Query: 837  TTSKAHTAVKIEQNY-HAPVVYVNNASRAVGVCTSLLSDEQRPGFIERLDLDYERTRDQH 895
            TTS+ HTAVKI   Y     +YV +ASRAVGV ++LLS+EQ+P +I+ +  +Y +  + H
Sbjct: 853  TTSRVHTAVKIHPRYEQGQAIYVTDASRAVGVVSALLSEEQKPAYIDGIRAEYAKVAEAH 912

Query: 896  ARKTPKSRPVTLEQARANKAALDWANYTPPAPAKPGVHVFENIALATLRPYIDWTPFFMT 955
            AR   + + + L +AR N   +DW++Y+   P   G  VFE   L  L  YIDWTPFF T
Sbjct: 913  ARNEREKQRLPLSRARENAHKIDWSSYSVVKPQFFGTKVFETYDLEELSRYIDWTPFFQT 972

Query: 956  WSLMGKYPAILEHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASVGDDIEV 1015
            W L G++PAILE E+ GE A++L+ DA A+L K+  E   +   +   +PA +VGDDI +
Sbjct: 973  WELKGRFPAILEDEKQGEAARQLYADAQAMLAKIIEEKWFRPRAVIGFWPANAVGDDIRL 1032

Query: 1016 YSDESRTQVAHVLYNLRQQTEKPKG-ANYCLSDYVAPKESGKRDWIGAFAVTGGIGERAL 1074
            ++DE R +     + LRQQ  K  G  N  LSD+VAP +SG  D++G F VT GI E A+
Sbjct: 1033 FTDEGRKEELATFFTLRQQLSKRDGRPNVALSDFVAPVDSGVADYVGGFVVTAGIEEVAI 1092

Query: 1075 ADAYKAQGDDYNAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLIRERYQG 1134
            A+ ++   DDY++I+++A+ADR AEAFAE +HE+VRKE WGYA DE L+ DDLI E Y G
Sbjct: 1093 AERFERANDDYSSILVKALADRFAEAFAERMHERVRKEFWGYAPDEALAGDDLIGEAYAG 1152

Query: 1135 IRPAPGYPACPEHTEKATLWQMLNVEETIGMSLTTSYAMWPGASVSGWYFSHPDSRYFAV 1194
            IRPAPGYPA P+HTEK TL+ +L+     G+ LT SYAMWPG+SVSG Y  HP+S YF V
Sbjct: 1153 IRPAPGYPAQPDHTEKKTLFALLDATNAAGVELTESYAMWPGSSVSGLYIGHPESYYFGV 1212

Query: 1195 AQIQPDQLHSYAERKGWRLEEAEKWLAPNLD 1225
            A+++ DQ+  YA RK   + E E+WL P L+
Sbjct: 1213 AKVERDQVLDYARRKDMPVTEVERWLGPVLN 1243