Pairwise Alignments

Query, 444 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., Putative Na(+)/H(+) exchanger protein, CPA1 family precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  114 bits (284), Expect = 1e-29
 Identities = 104/378 (27%), Positives = 174/378 (46%), Gaps = 42/378 (11%)

Query: 80  LLFAGGLGIKLPNLKDQKWEITVLALGATLFSTFFIGFTLYGFCQLIGIQFDLVYCLLFG 139
           LLFA G         +   EI  LAL   L +   IGF +Y     I     L+      
Sbjct: 65  LLFADGWKTPTREFLEHGREIFGLALALVLVTVVGIGFLIYWLVPGI----PLIPAFALA 120

Query: 140 ALISPTDPIAVLAIVKKLKAPKRISTQIEGESLFNDGFGLVIFVTIFTIAFGHETPTVGS 199
           A++SPTD +A+  IV + + PK+I   ++GE+L ND  GLV       +A G    TVG 
Sbjct: 121 AVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGLVSLKFAVAVAMGTMVFTVGG 180

Query: 200 VTLLFIQEAIGGIVYGFLLGLLFHYLIS-----ATDDHSMELLLTIGIPTAGYAFADVIH 254
            TL F + AIGGI+ GF++  L+   +        D+ + +++L   +P A Y  A+ I 
Sbjct: 181 ATLEFFKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEPATQIVLLFLLPFASYLIAEHIG 240

Query: 255 VSGPLAMVVSGIMIGNWTRFIGFSKESEEHLDHFWELVDEFLNGVLFLLIGMSM------ 308
           VSG LA V +G+ I                 +  W +++   NG++FLL+G+ +      
Sbjct: 241 VSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPGILES 300

Query: 309 --------------LLFEFHQEDWILMAFAVPLVLCGRYLSVFVSYIGF--KRYRSYNPW 352
                         +LF     D +L+  A+ LV  G   ++    + F  K+   +  W
Sbjct: 301 SLAAAEADPNVETWMLF----TDIVLIYAALMLVRFGWLWTMKKFSLRFLKKKPMEFASW 356

Query: 353 SIR---ILTWGGLRGGLALAMALSIPSGIMVIPE-KLIDVKELILVMTYAVVVFSILVQG 408
           + R   I ++ G+RG + LA  LSIP   +++P+      +  ++ +   V++FS+ V  
Sbjct: 357 TSREILIASFAGVRGAITLAGVLSIP---LLLPDGSGFPARYELVFLAAGVILFSLFVGV 413

Query: 409 STITPMIEKAKKAEKALQ 426
             +  +++  + A+ A Q
Sbjct: 414 IMLPLLLQHLEVADHAQQ 431