Pairwise Alignments

Query, 444 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., predicted cation/proton antiporter (NCBI) from Escherichia coli BW25113

 Score =  114 bits (285), Expect = 8e-30
 Identities = 103/363 (28%), Positives = 173/363 (47%), Gaps = 35/363 (9%)

Query: 80  LLFAGGLGIKLPNLKDQKWEITVLALGATLFSTFFIGFTLYGFCQLIGIQFDLVYCLLFG 139
           LLFA G         +   EI  LAL   + +   IGF +Y     I     L+      
Sbjct: 65  LLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGFLIYWVVPGI----PLIPAFALA 120

Query: 140 ALISPTDPIAVLAIVKKLKAPKRISTQIEGESLFNDGFGLVIFVTIFTIAFGHETPTVGS 199
           A++SPTD +A+  IV + + PK+I   ++GE+L ND  GLV       +A G    TVG 
Sbjct: 121 AVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGLVSLKFAVAVAMGTMIFTVGG 180

Query: 200 VTLLFIQEAIGGIVYGFLLGLLFHYLIS-----ATDDHSMELLLTIGIPTAGYAFADVIH 254
            T+ F++ AIGGI+ GF++  L+   +        D+ + +++L   +P A Y  A+ I 
Sbjct: 181 ATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEPATQIVLLFLLPFASYLIAEHIG 240

Query: 255 VSGPLAMVVSGIMIGNWTRFIGFSKESEEHLDHFWELVDEFLNGVLFLLIGM-------- 306
           VSG LA V +G+ I                 +  W +++   NG++FLL+G+        
Sbjct: 241 VSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPGILET 300

Query: 307 SMLLFEF--HQEDW------ILMAFAVPLVLCGRY--LSVFVSYIGFKRYRSYNPWSIR- 355
           S++  E   + E W      IL+  A+ LV  G    +  F +    K+   +  W+ R 
Sbjct: 301 SLMAAEIDPNVEIWMLFTNIILIYAALMLVRFGWLWTMKKFSNRFLKKKPMEFGSWTTRE 360

Query: 356 --ILTWGGLRGGLALAMALSIPSGIMVIPE-KLIDVKELILVMTYAVVVFSILVQGSTIT 412
             I ++ G+RG + LA  LSIP   +++P+  +   +  ++ +   V++FS+ V G  + 
Sbjct: 361 ILIASFAGVRGAITLAGVLSIP---LLLPDGNVFPARYELVFLAAGVILFSLFV-GVVML 416

Query: 413 PMI 415
           P++
Sbjct: 417 PIL 419