Pairwise Alignments

Query, 444 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., Na+/H+ antiporter from Escherichia coli ECOR38

 Score =  106 bits (264), Expect = 2e-27
 Identities = 102/366 (27%), Positives = 170/366 (46%), Gaps = 41/366 (11%)

Query: 80  LLFAGGLGIKLPNLKDQKWEITVLALGATLFSTFFIGFTLYGFCQLIGIQFDLVYCLLFG 139
           LLFA    I+   L     EI  LAL   L + F +G+ ++    L+     L+      
Sbjct: 65  LLFAESSKIQPKELIKHSREIISLALVLVLITIFGVGYVIH----LLLPNVPLIAAFALA 120

Query: 140 ALISPTDPIAVLAIVKKLKAPKRISTQIEGESLFNDGFGLVIFVTIFTIAFGHETPTVGS 199
           A++SPTD +A+L IV K +  K I   +EGE+L ND  GLV       +  G    +V  
Sbjct: 121 AVLSPTDAVALLGIVGKGRISKNIQEVLEGEALMNDASGLVALKFAVAVTMGTMEFSVHG 180

Query: 200 VTLLFIQEAIGGIVYGFLLGLLFH---YLIS--ATDDHSMELLLTIGIPTAGYAFADVIH 254
            T+ F   A+GGI  G  +  L+     LIS  A D+ S++++L + +P   Y  A+   
Sbjct: 181 ATIAFFVVALGGIAVGIAVTWLYGKGLLLISRYAHDEPSIQIVLMLLLPFIVYLVAEHFG 240

Query: 255 VSGPLAMVVSGIMIGNWTRFIGFSKESEEHL----DHFWELVDEFLNGVLFLLIGMSM-- 308
           +SG LA V +G+     T  IG    +   L       W +++   NG++FL++G+ +  
Sbjct: 241 LSGILAAVAAGLT----TSRIGVVHHAPIRLRIKAKSSWSMLEYVFNGMVFLILGLQLPG 296

Query: 309 LLFEF---HQEDWILMAFAVPLVLCGRYLSVFVSYIGF---------KR-------YRSY 349
           ++ E     + D ++   ++ L +   YL++ V  +G+         KR       +  Y
Sbjct: 297 IISESLIRAENDPLVDTGSLLLDVIWIYLALMVVRLGWLWLMRLYSRKRPGKHPMLFAGY 356

Query: 350 NPWSIRILTWGGLRGGLALAMALSIPSGIMVIPEKLIDVKELILVMTYAVVVFSILVQGS 409
               + + T+ G+RG + LA  LSIP   +++P+        +LV     V+   LV G 
Sbjct: 357 KTRHMLLATFAGVRGAITLAGVLSIP---LLLPDGTPFPGRYLLVFLATGVILFSLVCGI 413

Query: 410 TITPMI 415
            I P++
Sbjct: 414 IILPLL 419