Pairwise Alignments

Query, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., tRNA-dihydrouridine synthase A from Pseudomonas simiae WCS417

 Score =  381 bits (979), Expect = e-110
 Identities = 192/314 (61%), Positives = 232/314 (73%), Gaps = 2/314 (0%)

Query: 4   SCRLSVAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHGRGD-FLAYNQEEHPVAL 62
           S R SVAPM+DWTDRHCR+F RLLS   LLYTEMVTTGAI+HG  D FL +N+ EHP+AL
Sbjct: 7   SRRFSVAPMMDWTDRHCRFFLRLLSKHALLYTEMVTTGAILHGDHDRFLRHNEAEHPLAL 66

Query: 63  QFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMR 122
           Q GGS P DLA CA++A+  GYDE+NLNVGCPSDRVQN   GA LM  P LVAECV AMR
Sbjct: 67  QLGGSVPADLAACARMAEAAGYDEVNLNVGCPSDRVQNNMIGAILMAHPALVAECVKAMR 126

Query: 123 AVVDIPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLSPKENREI 182
             V IPVTVK RIGI+ +DSY  L  F+ TV +  GC  FT+HAR A L GLSPKENR+I
Sbjct: 127 DAVSIPVTVKHRIGINGRDSYAQLCDFVGTVKD-AGCTSFTVHARIAILEGLSPKENRDI 185

Query: 183 PPLDYPRAYQIKRDFPHLTIAVNGGVKSLEEAKLHLQHLDGVMIGREAYQNPYLLAEVDQ 242
           PPL Y  A Q+KRDFP L I +NGG+K+LE+   HLQ  DGVM+GREAY NPYLLAEVDQ
Sbjct: 186 PPLRYDVAAQLKRDFPELEIVLNGGIKTLEQCHEHLQVFDGVMLGREAYHNPYLLAEVDQ 245

Query: 243 QIFGLETPVKKRSQVIHEMMPYIERELSQGTHLGHMTRHMLGLFQNMPGARQWRRHISEN 302
           Q+FG E PV  R++ + ++ PYI   L+ G  + H+TRH+LGL    PGAR++R+ +S +
Sbjct: 246 QLFGSEAPVISRAEALVQLRPYIAEHLASGGSMHHITRHILGLGTGFPGARKFRQLLSVD 305

Query: 303 AHKPGAGLEVVEQA 316
            HK    L +++QA
Sbjct: 306 IHKARDPLALLDQA 319