Pairwise Alignments

Query, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., tRNA-dihydrouridine synthase DusB from Sphingobium sp. HT1-2

 Score =  111 bits (277), Expect = 3e-29
 Identities = 95/305 (31%), Positives = 136/305 (44%), Gaps = 49/305 (16%)

Query: 9   VAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHGRGDFL---AYNQEEHPVALQFG 65
           +APM   TD   R   R   +  L  TEM+ + A+I      L   A++  E PV++Q  
Sbjct: 5   LAPMTGVTDMPFRTLVRRFGSG-LNVTEMIASAAMIRETRQSLQKAAWHPLEEPVSMQLA 63

Query: 66  GSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMRAVV 125
           G +P ++A  AKL  +RG   I++N+GCP  +V NG  G+ LM +  L A  + A    V
Sbjct: 64  GCSPTEMAEAAKLNADRGAAIIDINMGCPVKKVVNGDAGSALMRDLPLAAALIKATVEAV 123

Query: 126 DIPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKA---------WLSGLSP 176
           D+PVTVK R+G D           +A +AE  G +  T+H R           W    S 
Sbjct: 124 DVPVTVKMRMGWDHS---SLNAPELAHIAEDLGAKLITVHGRTRCQMYKGSADWGFVRSV 180

Query: 177 KENREIPPLDYPRAYQIKRDFPHLTIAVNGGVKSLEEAKLHLQH--LDGVMIGREAYQNP 234
           KE  ++P                  + VNG + S+E+A+  L     DGVMIGR AY  P
Sbjct: 181 KEAVKLP------------------VIVNGDICSIEDAETALDQSGADGVMIGRGAYGKP 222

Query: 235 YLLAEVDQQIFGLETPVKKRSQVIHEMMPYIERELSQGTHLGHMTRHMLGLFQNMPGARQ 294
           +LL +V   +    T  ++    + E    I              R ML  + NM G   
Sbjct: 223 WLLGQV---MHWFATGERRADPSLAEQYDMITEHY----------RMMLDHYDNMTGVNM 269

Query: 295 WRRHI 299
            R+HI
Sbjct: 270 ARKHI 274