Pairwise Alignments

Query, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., tRNA dihydrouridine synthase DusB from Magnetospirillum magneticum AMB-1

 Score =  110 bits (276), Expect = 4e-29
 Identities = 94/316 (29%), Positives = 149/316 (47%), Gaps = 23/316 (7%)

Query: 9   VAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHGRGDFLAYNQ---EEHPVALQFG 65
           +APM   TD   R   + L A  L+ +EM+ + A+I      +   Q   EE P+++Q  
Sbjct: 22  LAPMAGVTDMPNRRLVKRLGAG-LVVSEMIASQAMIRQNRQTMQMAQHTAEEFPMSVQLA 80

Query: 66  GSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQ-NGRFGACLMGEPDLVAECVAAMRAV 124
           G  PK +A  AKL Q+ G   I++N+GCP  +V   G  G+ LM   +L A  + A+   
Sbjct: 81  GCEPKVMAEAAKLNQDLGAAIIDINMGCPVKKVALKGEAGSALMRNENLAARILTAVVKA 140

Query: 125 VDIPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLSPKENREIPP 184
           VDIPVT+K R G D           +A VAE+ G    T+H R         +       
Sbjct: 141 VDIPVTLKMRTGWDMNSRN---APSLARVAEECGIRMVTVHGR--------TRNQMYTGQ 189

Query: 185 LDYPRAYQIKRDFPHLTIAVNGGVKSLEEA--KLHLQHLDGVMIGREAYQNPYLLAEVDQ 242
            D+    ++KR    + +  NG V+S+++A   L L   DGVMIGR  Y  P+L  +V  
Sbjct: 190 ADWAFIGEVKRAV-SIPVIGNGDVESIDDAVRMLELSGADGVMIGRGTYGRPWLPGQVAH 248

Query: 243 QI-FGLETPVKKRSQVIHEMMPYIERELSQ-GTHLG--HMTRHMLGLFQNMPGARQWRRH 298
            +  G   P   R++ +  M+ +++  LS  G+  G     +HM    + +PG+ ++R  
Sbjct: 249 YLATGERLPDPSRAEQLQIMLEHLDAMLSHYGSEPGVRIARKHMAWYSKGLPGSAEFRAE 308

Query: 299 ISENAHKPGAGLEVVE 314
           ++         L + E
Sbjct: 309 VNRTNDPDQLRLAITE 324