Pairwise Alignments

Query, 240 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., YheO-like PAS domain from Variovorax sp. SCN45

 Score = 60.8 bits (146), Expect = 2e-14
 Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 24/212 (11%)

Query: 27  DKVILRSYEAVVDGIASLIGPFCEIVLHSLEDLNTSAIKIANGENTGRQVGSPITDMALK 86
           +K +L     + +G+     PFCE+V+H L +   +   I N   +GR+VG  +T++ L 
Sbjct: 6   NKQVLEMLRNMAEGLGQTFAPFCEVVVHDLSNPKNAIYAIEN-SLSGREVGQSVTELGLA 64

Query: 87  MLRDIEGSERNFSRSYFTRAKGGVLMKSITVAIRNGENRVIGLLCINVNLD--APFSQVL 144
            ++D E        +Y      G  +KS ++ I++     +  LC+NV+L     F   +
Sbjct: 65  RIQDPEFPA--VIANYANTFPDGRKVKSTSIGIKDESGEYVAALCLNVDLTLFQSFQGAI 122

Query: 145 KSFMPTQEAQ---EAASSVNFASDVEELVDQ------TVERTIEEINGDKSVSNNTKNRQ 195
             F    + Q      +  N    +   +D+      T  R+++  +           +Q
Sbjct: 123 SQFTRIDDKQVHEHIEAGGNHTDRIHARIDEFAAARATTSRSLKPAD----------RKQ 172

Query: 196 IVMALFDKGIFDIKDAINRVADRLNISKHTVY 227
           +V  L   G+ +++      A  + +S+ TVY
Sbjct: 173 LVQDLKKAGLLEVRRGAEIAAAHMGVSRATVY 204