Pairwise Alignments

Query, 240 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., PAS domain-containing protein from Dickeya dadantii 3937

 Score = 84.7 bits (208), Expect = 1e-21
 Identities = 48/205 (23%), Positives = 97/205 (47%), Gaps = 4/205 (1%)

Query: 27  DKVILRSYEAVVDGIASLIGPFCEIVLHSLEDLNTSAIKIANGENTGRQVGSPITDMALK 86
           D ++     A+ +G+     PFCE+V+H L++   + + I N  + GR+VG P T++ L 
Sbjct: 6   DSILFEQLGAIAEGLGETFAPFCEVVIHDLKNPEHAILAIYNNLS-GREVGQPATELGLA 64

Query: 87  MLRDIEGSERNFSRSYFTRAKGGVLMKSITVAIRNGENRVIGLLCINVNLDAPFSQVLKS 146
            +   E        +Y  +   G  +KS ++ I++  +  +  LC+NV++   F  +  +
Sbjct: 65  RIASPEFPR--IVANYANQFADGRPVKSTSIGIKDASDEYVASLCLNVDMTL-FRGIQHA 121

Query: 147 FMPTQEAQEAASSVNFASDVEELVDQTVERTIEEINGDKSVSNNTKNRQIVMALFDKGIF 206
           F    +    A + +      E + Q +++    +          + RQ++  L + G+ 
Sbjct: 122 FARFNQVSTGALNESLEPSGSEAIRQRIDQFAARLATTPRALKAPERRQLIQELREHGLL 181

Query: 207 DIKDAINRVADRLNISKHTVYLYIR 231
           D+K ++  +A  L IS+ +VY Y R
Sbjct: 182 DVKKSMETIAQHLGISRASVYSYAR 206