Pairwise Alignments

Query, 326 a.a., protease modulator HflC from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex from Pseudomonas putida KT2440

 Score =  233 bits (594), Expect = 4e-66
 Identities = 123/317 (38%), Positives = 197/317 (62%), Gaps = 37/317 (11%)

Query: 5   LIPSIVLIIAALLMSMFVIPEGERGIVIRFGRVLKDNNDLARIYEPGLHFKMPLFDRVKT 64
           LI ++VL I A   S +++ + ER +++RFG+V++ +       +PGLH K+P  ++V+ 
Sbjct: 9   LIAAVVLAIVAW-NSFYIVSQTERAVLLRFGKVVQAD------VQPGLHVKIPYVNQVRR 61

Query: 65  LDARIQTMDGRSDRFVTSEKKDVIIDTYVKWRIEDFGQYYLATGGGNALTAEALLERKVT 124
            DAR+ T+D  + RF+T EKK V++D Y KWR++D  ++Y AT G   + A+  L R++ 
Sbjct: 62  FDARLMTLDAPTQRFLTLEKKAVMVDAYAKWRVKDAERFYTATSGMKQI-ADERLSRRLE 120

Query: 125 DVLRSEIGAREIKQIVSGPRNVAVLPENADSSELTTEAAKEAMEIDGQRDQIMSEVLNDT 184
             LR + G R + ++VSG                             +RD +M+++    
Sbjct: 121 SGLRDQFGKRTLHEVVSG-----------------------------ERDALMADITASL 151

Query: 185 RESAMKDLGVYVVDFRMKKINLPDEISESIYRRMRAERESVARKHRSQGREKAEVIRAQA 244
              A K+LG+ VVD R+K I+LP E++ S++ RM  ERE  AR+HR++G E AE IRA A
Sbjct: 152 NRMASKELGIEVVDVRVKAIDLPKEVNRSVFDRMSTEREREAREHRAKGNELAEGIRADA 211

Query: 245 ELEVATILAEADKTARVTRGTADAEAAKIYSDAYKKDPEFFSFLRSLRAYEKSFNSKNDI 304
           + +   +LAEA + A  TRG  DA+AA IY+ AY +D +F++F RSL+AY +SF+SK+D+
Sbjct: 212 DRQRRVLLAEAYREAEETRGDGDAQAAAIYAKAYSQDADFYAFHRSLQAYRESFSSKSDV 271

Query: 305 LVLDPNSEFFQYMNNAK 321
           +VLDP +EFF+Y++ ++
Sbjct: 272 MVLDPKNEFFRYLDKSR 288