Pairwise Alignments

Query, 326 a.a., protease modulator HflC from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., modulator for HflB protease specific for phage lambda cII repressor (NCBI) from Escherichia coli BW25113

 Score = 57.0 bits (136), Expect = 8e-13
 Identities = 76/338 (22%), Positives = 131/338 (38%), Gaps = 61/338 (18%)

Query: 2   RKLLIPSIVLIIAALLMSMFVIPEGERGIVIRFGRVLKDNNDLARIYEPGLHFKMPLFDR 61
           R + I +  ++I       + I E ERG+V RFG+        + + EPGL++K    D 
Sbjct: 79  RVVTIAAAAIVIIWAASGFYTIKEAERGVVTRFGK-------FSHLVEPGLNWKPTFIDE 131

Query: 62  VKTLDARIQTMDGRSDRFVTSEKKDVIIDTYVKWRIEDFGQY-YLATGGGNALTAEALLE 120
           VK ++         S   +TS++  V ++  V++R+ +  +Y Y  T   ++L       
Sbjct: 132 VKPVNVEAVRELAASGVMLTSDENVVRVEMNVQYRVTNPEKYLYSVTSPDDSL------- 184

Query: 121 RKVTD-VLRSEIGAREIKQIVSGPRNVAVLPENADSSELTTEAAKEAMEIDGQRDQIMSE 179
           R+ TD  LR  IG   + +I++  R V                    +  D QR+  + E
Sbjct: 185 RQATDSALRGVIGKYTMDRILTEGRTV--------------------IRSDTQRE--LEE 222

Query: 180 VLNDTRESAMKDLGVYVVDFRMKKINLPDEISESIYRRMRAERESVARKHRSQGREKAEV 239
            +         D+G+ ++D   +    P+E+  +       +    AR++  Q   +AE 
Sbjct: 223 TIRP------YDMGITLLDVNFQAARPPEEVKAAF------DDAIAARENEQQYIREAEA 270

Query: 240 ----IRAQAELEVATILAEADKTARVTRGTADAEAAKIYS--DAYKKDPEFFSFLRSLRA 293
               ++ +A  +   IL EA      T   A  E A+       YK  PE       +  
Sbjct: 271 YTNEVQPRANGQAQRILEEARAYKAQTILEAQGEVARFAKLLPEYKAAPEITRERLYIET 330

Query: 294 YEKSFNSKNDILVLDPNSEFF-----QYMNNAKGAAAK 326
            EK   +   +LV D           Q +      AAK
Sbjct: 331 MEKVLGNTRKVLVNDKGGNLMVLPLDQMLKGGNAPAAK 368