Pairwise Alignments

Query, 395 a.a., protease modulator HflK from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  308 bits (790), Expect = 1e-88
 Identities = 167/398 (41%), Positives = 239/398 (60%), Gaps = 26/398 (6%)

Query: 1   MAWNEPGNNNGNNGRDNDPWGNNNRGNKGGRDQGPPDLDEVFNKLSQKLGGKFGG----- 55
           MAWNEPG N+ N     DPWG   R N  G  +GPPDLDE F KL + L G FGG     
Sbjct: 1   MAWNEPGGNSNNQ----DPWGGKRRNN--GDRKGPPDLDEAFRKLQESLNGLFGGGKKRG 54

Query: 56  --KGGKGPSFSGGGAIGFGVIAAIAVAVWFFTGFYTIGEAERGVVLRLGKYDRIVDPGLN 113
              GG+     G G +G G++  +  AVW ++  Y + E E+ VVLR GKY   V PGLN
Sbjct: 55  GDDGGRTSKGGGYGLLGLGLV--VLAAVWLYSAVYVVDEQEQAVVLRFGKYYETVGPGLN 112

Query: 114 WRPRFIDEVTPVNVQAIRSLRASGLMLTKDENVVTVSMDVQYRIADPYKYLYRVTNADDS 173
                ID+    NV   R+    G MLT+DEN+V V + VQY+I++   ++  V   + S
Sbjct: 113 IYFPPIDKKYMENVTRERAYTKQGQMLTEDENIVEVPLTVQYKISNLQDFVLNVDQPEIS 172

Query: 174 LRQATDSALRAVVGDSLMDSILTSGRQQIRQSTQQTLNQVIDSYDMGLMIVDVNFQSARP 233
           L+ AT+SALR VVG + MD +LT GR+ +    ++ L + +D+Y  G+ +  VN QSA  
Sbjct: 173 LQHATESALRHVVGSTAMDQVLTEGRELMASEIKERLQRFLDTYRTGITVTQVNVQSAAA 232

Query: 234 PEQVKDAFDDAIAAREDEERFIREAEAYKNEILPKATGRAERLKKEAQGYNERTINEALG 293
           P +V++AFDD I AREDE+R   +AE Y N ++P+A G+A+R+ ++A GY +  ++ A G
Sbjct: 233 PREVQEAFDDVIRAREDEQRSRNQAETYANGVVPEARGQAQRILEDANGYRDEVVSRAKG 292

Query: 294 QVAQFEKLLPEYQAAPKVTRDRLYLDAMEQVYSNTSKVLIDSESSG--NLLYLPIDKL-- 349
           +  +F KL+ EY+ AP+VTR+RLYLD M++V+SNTSKVL+     G  NLLYLP+DK+  
Sbjct: 293 EADRFTKLVAEYRKAPEVTRERLYLDTMQEVFSNTSKVLVTGSKGGQNNLLYLPLDKMIE 352

Query: 350 -------AGQDNKTAQPRPNKSSSAYDQIELESQTTET 380
                  A     TA      + +A D ++ +++T E+
Sbjct: 353 GGRSSTSAPSTGSTAAANEASARAAADLLQQQTRTRES 390