Pairwise Alignments

Query, 395 a.a., protease modulator HflK from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex from Pseudomonas putida KT2440

 Score =  317 bits (811), Expect = 5e-91
 Identities = 173/400 (43%), Positives = 240/400 (60%), Gaps = 13/400 (3%)

Query: 1   MAWNEPGNNNGNNGRDNDPWGNNNRGNKGGRDQ-GPPDLDEVFNKLSQKLGGKFGG---K 56
           MAWNEPG N+ N     DPWG    G  GG D+ GPPDLDE F KL   L G FGG   +
Sbjct: 13  MAWNEPGGNSNNQ----DPWGGRRGGGGGGGDKKGPPDLDEAFRKLQDSLNGMFGGSKKR 68

Query: 57  GGKGPSFSGGGAIGF-GVIAAIAVAVWFFTGFYTIGEAERGVVLRLGKYDRIVDPGLNWR 115
           GG   +   GG +G  G+  A+  A+W ++  Y + E E+ VVLR GKY   V PGLN  
Sbjct: 69  GGGDRNVGKGGGLGLLGIGLAVLAAIWLYSAVYVVDEQEQAVVLRFGKYYETVGPGLNIY 128

Query: 116 PRFIDEVTPVNVQAIRSLRASGLMLTKDENVVTVSMDVQYRIADPYKYLYRVTNADDSLR 175
              ID     NV   R+    G MLT+DEN+V V + VQY+I++   ++  V   + SL+
Sbjct: 129 FPPIDRKYMENVTRERAYTKQGQMLTEDENIVEVPLTVQYKISNLQDFVLNVDQPEVSLQ 188

Query: 176 QATDSALRAVVGDSLMDSILTSGRQQIRQSTQQTLNQVIDSYDMGLMIVDVNFQSARPPE 235
            ATDSALR VVG + MD +LT GR+Q+    ++ L + +D+Y  G+ +  VN QSA  P 
Sbjct: 189 HATDSALRHVVGSTSMDQVLTEGREQMAVDIRERLQRFLDNYRTGITVTQVNVQSAAAPR 248

Query: 236 QVKDAFDDAIAAREDEERFIREAEAYKNEILPKATGRAERLKKEAQGYNERTINEALGQV 295
           +V++AFDD I AREDE+R   +AE+Y N ++P+A G+A+R+ ++A GY +  I  A G+ 
Sbjct: 249 EVQEAFDDVIRAREDEQRARNQAESYANGVVPEARGQAQRIIEDANGYRDEVIARAKGEA 308

Query: 296 AQFEKLLPEYQAAPKVTRDRLYLDAMEQVYSNTSKVLI-DSESSGNLLYLPIDKLAGQDN 354
            +F KLL EY+ AP VTR+RLYL+ M++VYSN+SKV++   +   NLLYLP+DK+     
Sbjct: 309 DRFTKLLAEYRKAPDVTRERLYLETMQEVYSNSSKVMVATKDGQSNLLYLPLDKMVEGSR 368

Query: 355 KTAQPRPNKSSSAYDQIELESQTTETNTDTQSRSTTRQGR 394
           K + P  + S SA D     +Q  +     Q    TR+ R
Sbjct: 369 KPSVPTTSASPSANDAAARAAQDMQ---QQQQPLRTRESR 405