Pairwise Alignments

Query, 429 a.a., GTPase HflX from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

 Score = 59.3 bits (142), Expect = 3e-13
 Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 12/173 (6%)

Query: 197 IPTISLVGYTNAGKSTLFNRITEA-GVYAADQLFATLDPTLRKIDLVDVG--PAVLADTV 253
           +P ++LVG  N GKSTLFNR+T       AD    T D   RK     +G    ++ DT 
Sbjct: 2   VPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRD---RKYGQAKLGEHEFIVIDTG 58

Query: 254 GFIRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQ-AVETVLQEIDAHEVPT 312
           G             + +L    EAD++L +VD      R  +  A E + Q +   E P 
Sbjct: 59  GIDGSEEGVETKMAQQSLAAIDEADVVLFMVDG-----RAGLTVADEAIAQHLRRIEKPA 113

Query: 313 LLVMNKIDNLEEQSPRIERDDEGVPRVVWISAMQGAGTELLFEALSERLASQV 365
           +LV+NK+D ++  +   E    G+ ++  I+A  G G   L + +    A Q+
Sbjct: 114 ILVVNKVDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQM 166



 Score = 48.1 bits (113), Expect = 6e-10
 Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 20/223 (8%)

Query: 155 PGETQLETDRRLLRERIKAILRRLEKVAKQREQGRRARSRAE-IPT-ISLVGYTNAGKST 212
           P   Q+E+++  L +         E++    E+      R + +P  ++++G  N GKST
Sbjct: 161 PFAEQMESEQAQLEDLTNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKST 220

Query: 213 LFNRIT-EAGVYAADQLFATLDPTLRKIDLVDVGPAVLADTVGFIRHLP-HDLVAAFKA- 269
           L NRI  E  V   D    T D     +   D    VL DT G  R    ++ V  F   
Sbjct: 221 LTNRILGEERVVVYDMPGTTRDSIYIPMKR-DEREYVLIDTAGVRRRKRINETVEKFSVV 279

Query: 270 -TLQETQEADILLHVVDASDERFRENIQAVETVLQEIDAHEVPTLLV-MNKIDNLE---E 324
            TLQ  ++A+++L VVDA     RENI   +  L     +   ++++ +NK D L    +
Sbjct: 280 KTLQAIEDANVVLLVVDA-----RENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVK 334

Query: 325 QSPRIERDDE----GVPRVVWISAMQGAGTELLFEALSERLAS 363
           +  + E D         R+ +ISA+ G G   LFE++ E   S
Sbjct: 335 EHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRS 377