Pairwise Alignments

Query, 429 a.a., GTPase HflX from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., ribosome biogenesis GTPase Der from Erwinia tracheiphila SCR3

 Score = 58.5 bits (140), Expect = 4e-13
 Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 8/161 (4%)

Query: 197 IPTISLVGYTNAGKSTLFNRITEA-GVYAADQLFATLDPTLRKIDLVDVGPAVLADTVGF 255
           IP ++LVG  N GKSTLFNR+T       AD    T D    + + V+    +  DT G 
Sbjct: 2   IPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAE-VEGREFICIDTGGI 60

Query: 256 IRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAV-ETVLQEIDAHEVPTLL 314
                         +L   +EAD++L +VDA     R  + A  + + + +   E PT L
Sbjct: 61  DGTEEGVETRMAGQSLLAIEEADVVLFMVDA-----RAGLMAADQAIAKHLRTREKPTFL 115

Query: 315 VMNKIDNLEEQSPRIERDDEGVPRVVWISAMQGAGTELLFE 355
           V+NK D L+  S  ++    G+  +  I+A  G G   L E
Sbjct: 116 VVNKTDGLDADSAVVDFWSLGLGDIYPIAASHGRGVTSLLE 156



 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 19/200 (9%)

Query: 173 AILRRLEKVAKQREQGRRARSRAEIPT-ISLVGYTNAGKSTLFNRI-TEAGVYAADQLFA 230
           A L   E   +  E+ R   +  ++P  +++VG  N GKSTL NRI  E  V   D    
Sbjct: 180 AALALKENPEEADEETRDDFNPLDLPIKLAIVGRPNVGKSTLTNRIFGEDRVVVYDMPGT 239

Query: 231 TLDPTLRKIDLVDVGPAVLADTVGF-IRHLPHDLVAAFKA--TLQETQEADILLHVVDAS 287
           T D     ++  D    VL DT G   R    D V  F    TLQ  ++A++++ V+DA 
Sbjct: 240 TRDSIYIPMER-DGREYVLIDTAGVRKRGKITDTVEKFSVIKTLQAIEDANVVMLVIDAR 298

Query: 288 DERFRENIQAVETVLQEIDAHEVPTLLVMNKIDNLEEQSPRIERDDE--------GVPRV 339
           +    +++  +  +L    +     ++V+NK D L  Q  R E  +            RV
Sbjct: 299 EGISDQDLSLLGFILNSGRS----LVIVVNKWDGL-SQDVRDEVKEALDYRLGFIDFARV 353

Query: 340 VWISAMQGAGTELLFEALSE 359
            +ISA+ G+G   LFE+++E
Sbjct: 354 HFISALHGSGVGNLFESVTE 373