Pairwise Alignments

Query, 429 a.a., GTPase HflX from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., ribosome biogenesis GTPase Der from Escherichia coli ECRC62

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 6/160 (3%)

Query: 197 IPTISLVGYTNAGKSTLFNRITEA-GVYAADQLFATLDPTLRKIDLVDVGPAVLADTVGF 255
           +P ++LVG  N GKSTLFNR+T       AD    T D    + + ++    +  DT G 
Sbjct: 2   VPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAE-IEGREFICIDTGGI 60

Query: 256 IRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVETVLQEIDAHEVPTLLV 315
                       + +L   +EAD++L +VDA        + A E + + + + E PT LV
Sbjct: 61  DGTEDGVETRMAEQSLLAIEEADVVLFMVDAR----AGLMPADEAIAKHLRSREKPTFLV 116

Query: 316 MNKIDNLEEQSPRIERDDEGVPRVVWISAMQGAGTELLFE 355
            NK D L+     ++    G+  +  I+A  G G   L E
Sbjct: 117 ANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLE 156



 Score = 47.8 bits (112), Expect = 8e-10
 Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 33/206 (16%)

Query: 200 ISLVGYTNAGKSTLFNRIT-EAGVYAADQLFATLDPTLRKIDLVDVGPAVLADTVGF-IR 257
           +++VG  N GKSTL NRI  E  V   D    T D     ++  D    VL DT G   R
Sbjct: 205 LAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMER-DGREYVLIDTAGVRKR 263

Query: 258 HLPHDLVAAFKA--TLQETQEADILLHVVDASDERFRENIQAVETVLQEIDAHEVPTLLV 315
               D V  F    TLQ  ++A++++ V+DA +    +++  +  +L    +     ++V
Sbjct: 264 GKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRS----LVIV 319

Query: 316 MNKIDNLEEQSPRIERDD-------EGVPRVVWISAMQGAGTELLFEALSE--------- 359
           +NK D L ++     ++            RV +ISA+ G+G   LFE++ E         
Sbjct: 320 VNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRV 379

Query: 360 ------RLASQVVEHHLRIPPRHQGR 379
                 R+ +  VE H   PP  +GR
Sbjct: 380 GTSMLTRIMTMAVEDHQ--PPLVRGR 403