Pairwise Alignments

Query, 429 a.a., GTPase HflX from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., ribosome biogenesis GTPase Der from Dickeya dianthicola ME23

 Score = 60.1 bits (144), Expect = 2e-13
 Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 6/160 (3%)

Query: 197 IPTISLVGYTNAGKSTLFNRITEA-GVYAADQLFATLDPTLRKIDLVDVGPAVLADTVGF 255
           IP ++LVG  N GKSTLFNR+T       AD    T D    + + ++    ++ DT G 
Sbjct: 2   IPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAE-IEGNEFIIIDTGGI 60

Query: 256 IRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVETVLQEIDAHEVPTLLV 315
             +         + +L   +EADI+L +VDA D      + A   + Q +   E  T LV
Sbjct: 61  DGNEDGVGTRMAEQSLLAIEEADIVLFLVDARDGL----MPADHAIAQHLRTREKDTFLV 116

Query: 316 MNKIDNLEEQSPRIERDDEGVPRVVWISAMQGAGTELLFE 355
            NK+D ++  S   +    G+  V  I+A  G G   L E
Sbjct: 117 ANKVDGIDIDSGIADFYSLGLGEVHPIAASHGRGVTSLLE 156



 Score = 47.8 bits (112), Expect = 8e-10
 Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 16/171 (9%)

Query: 200 ISLVGYTNAGKSTLFNRIT-EAGVYAADQLFATLDPTLRKIDLVDVGPAVLADTVGF-IR 257
           +++VG  N GKSTL NRI  E  V   D    T D     ++  D    VL DT G   R
Sbjct: 210 LAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMER-DGRDYVLIDTAGVRKR 268

Query: 258 HLPHDLVAAFKA--TLQETQEADILLHVVDASDERFRENIQAVETVLQEIDAHEVPTLLV 315
               D V  F    TLQ  ++A+++L V+DA +    +++  +  +L    +     ++V
Sbjct: 269 GKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQDLSLLGFILNSGRS----LVIV 324

Query: 316 MNKIDNLEEQSPRIERDDEGV-------PRVVWISAMQGAGTELLFEALSE 359
           +NK D L ++     ++   +        R+ +ISA+ G+G   LFE+++E
Sbjct: 325 VNKWDGLSQEVKDQVKETLDLRLGFIDFARIHFISALHGSGVGNLFESVTE 375