Pairwise Alignments

Query, 87 a.a., RNA-binding protein Hfq from Vibrio cholerae E7946 ATCC 55056

Subject, 81 a.a., RNA-binding protein Hfq from Variovorax sp. SCN45

 Score =  115 bits (289), Expect = 7e-32
 Identities = 55/72 (76%), Positives = 63/72 (87%)

Query: 3  KGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAISTV 62
          KGQ LQDPFLN LRRE +PVSIYLVNGIKLQGQIESFDQ+V+LL+NTV QMVYKHAIST+
Sbjct: 4  KGQLLQDPFLNTLRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAISTI 63

Query: 63 VPARPVSHHSGD 74
          VP R V+  + +
Sbjct: 64 VPGRAVNFSAAE 75