Pairwise Alignments

Query, 87 a.a., RNA-binding protein Hfq from Vibrio cholerae E7946 ATCC 55056

Subject, 86 a.a., RNA-binding protein Hfq from Pseudomonas putida KT2440

 Score =  122 bits (306), Expect = 8e-34
 Identities = 61/85 (71%), Positives = 69/85 (81%), Gaps = 7/85 (8%)

Query: 1  MAKGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS 60
          M+KG SLQDP+LN LR+E++PVSIYLVNGIKLQG IESFDQFV+LLKNTV+QMVYKHAIS
Sbjct: 1  MSKGHSLQDPYLNTLRKEKVPVSIYLVNGIKLQGSIESFDQFVVLLKNTVSQMVYKHAIS 60

Query: 61 TVVPARPV-------SHHSGDRPAS 78
          TVVPARPV       S H    P +
Sbjct: 61 TVVPARPVRLPSPTDSEHGDSEPGN 85