Pairwise Alignments

Query, 87 a.a., RNA-binding protein Hfq from Vibrio cholerae E7946 ATCC 55056

Subject, 83 a.a., RNA-binding protein Hfq from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  118 bits (296), Expect = 1e-32
 Identities = 60/78 (76%), Positives = 66/78 (84%), Gaps = 2/78 (2%)

Query: 3  KGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAISTV 62
          KGQ LQDPFLN LRRE +PVSIYLVNGIKLQGQIESFDQ+V+LL+NTV QMVYKHAIST+
Sbjct: 5  KGQLLQDPFLNQLRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAISTI 64

Query: 63 VPARPV--SHHSGDRPAS 78
          VP RPV  S    D PA+
Sbjct: 65 VPGRPVQFSAVGTDEPAA 82