Pairwise Alignments

Query, 87 a.a., RNA-binding protein Hfq from Vibrio cholerae E7946 ATCC 55056

Subject, 115 a.a., RNA chaperone Hfq from Kangiella aquimarina DSM 16071

 Score =  127 bits (320), Expect = 3e-35
 Identities = 63/73 (86%), Positives = 68/73 (93%)

Query: 1  MAKGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS 60
          M+KGQSLQDPFLNALRRE++PVSIYLVNGIKLQGQIESFDQFVILLKNTV+QMVYKHA+S
Sbjct: 1  MSKGQSLQDPFLNALRREKVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAVS 60

Query: 61 TVVPARPVSHHSG 73
          TVVP R V  H G
Sbjct: 61 TVVPIRNVRGHYG 73