Pairwise Alignments

Query, 315 a.a., tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., tRNA dimethylallyltransferase (EC 2.5.1.75) from Variovorax sp. SCN45

 Score =  293 bits (751), Expect = 3e-84
 Identities = 162/313 (51%), Positives = 210/313 (67%), Gaps = 12/313 (3%)

Query: 6   PLALFLMGPTASGKTDLAIRLRQKYPVEIISVDSALIYRGMDIGTAKPDAQELALAPHRL 65
           P  + L GPTASGKT +A+ +     VEI+SVDSAL+YRGMDIGTAKP A+E A  PH L
Sbjct: 29  PRYVALAGPTASGKTAVALAMSMVRRVEIVSVDSALVYRGMDIGTAKPTAEERAAVPHHL 88

Query: 66  IDILDPSEAYSAADFRRDALKEMADIVAQGKIPLLVGGTMLYFKALLEGLSPLPAADPVI 125
           IDILDP E+YSAA F  DA + + +I A+G +PLLVGGTMLYFKAL +G+  +PAAD  +
Sbjct: 89  IDILDPRESYSAAAFVADATRLIGEIRARGALPLLVGGTMLYFKALFDGIDAMPAADAAV 148

Query: 126 RQQIELEAEKLGWQALHDQLQQIDPVSAQRIHPNDPQRLSRALEVYRISGKTLTELTQTK 185
           R +I+ EA  LGW A+H +L Q+DPV+A R+ P D QR+ RALEV+  SG+ L+    + 
Sbjct: 149 RARIDAEAAALGWPAMHARLAQVDPVTAARLAPQDSQRIQRALEVWESSGQPLSSFHASD 208

Query: 186 GE-AIPYR-VLQFAIAPKERAELHRRIELRFEKMVESGFEEEVKALYARDDLHPDLPSIR 243
            + A P    L F++ P  RA LH RI  RF+ M+ +GF +EVKAL AR DL  +LPS+R
Sbjct: 209 NKTAKPVEGGLLFSLEPNNRAWLHARIAERFDAMLAAGFLDEVKALRARGDLSTELPSMR 268

Query: 244 CVGYRQMWDYLDGHGT-------LDEAIYRGICATRQLAKRQITWLRSWDDLTWLDSE-- 294
           CVGYRQ W+ LD  GT       + +   RGI ATRQLAKRQ+TWLRS    T +  +  
Sbjct: 269 CVGYRQAWETLDACGTSQPDARAMADLRERGIAATRQLAKRQVTWLRSMPQRTVIACDAP 328

Query: 295 -NVDQAVETLSNA 306
             V  A++ ++ A
Sbjct: 329 YAVQNAIQLIAKA 341