Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 503 a.a., N-acetylmuramoyl-L-alanine amidase from Rhodanobacter sp000427505 FW510-R12

 Score =  274 bits (700), Expect = 7e-78
 Identities = 187/508 (36%), Positives = 266/508 (52%), Gaps = 79/508 (15%)

Query: 20  LFGFV---LLAIAPQTWANV--LEGVRVWPSPDETRVVLDVKSEVDYSYFTLSSPE-RLV 73
           L GFV   +LA AP   A    L+  RVW  P+ TRVVLD    + Y   T+S  + ++V
Sbjct: 8   LGGFVAAAILAAAPLCAAQAADLKAARVWAGPEYTRVVLDATGPLHY---TISQKDGQVV 64

Query: 74  VDLKQSTSRAKLPVNVTESGILSKVRASSPPE-KSTFRLVFELKQKTTPTLFKLAPTPGG 132
           VDL +S    ++    ++       R  S        +L   +   +    F+L P  G 
Sbjct: 65  VDLSES----RVAHGFSDPAAQGLYRGMSHTRIGDNLQLTARVAPASRLKTFELKPASGS 120

Query: 133 QYGHRLVIDM-PHGKVSESSSASTPSS--------------PAQVSKD-----------A 166
            Y  RLV+D+ P  + +++  AS P++              P+Q S             A
Sbjct: 121 NY--RLVLDLYPAREGTDTGVASAPAATPKAAPAKVIAAPAPSQYSNPTHSRRVAAEHAA 178

Query: 167 SQLLGNDDIVVAIDAGHGGEDPGSIGPTRKYEKDITLSVSKKLADQLNAVPGMKAVLTRR 226
           + L G   +VVAIDAGHGG+DPGS GP    EK++TL+V+++LA Q+N  PGMKAVLTR 
Sbjct: 179 ALLNGQRQVVVAIDAGHGGKDPGSHGPGGTLEKNVTLAVARELAAQINRQPGMKAVLTRS 238

Query: 227 GDYFVNLNKRTEIARRSKAHLLVSVHADAFHTPQPRGGSVFVLNTRRANTEIARWVENHE 286
            D+F+ L +R  IAR   A L VS+HADAF     RG SV+VL+ R   +E ARW+ + E
Sbjct: 239 SDFFIPLAQRYRIAREHNADLFVSIHADAFTRDDARGSSVWVLSPRGKTSEAARWLADRE 298

Query: 287 QQSELLGGAGEVLSKTNNDRNVSQTLLDLQFSHSQKEGYKVATNILREMGKVAHLHKTEP 346
            +++L+GG     +  + D ++++ LLD+Q   + +    VA N+L+ + ++   H+   
Sbjct: 299 NRADLIGGT----TLDDKDDSLAKVLLDMQQGWAMQASDVVAGNVLKALSQLGPPHRGYV 354

Query: 347 VNASLAVLKSPDIPSVLVETGFISNPSEEKLLIQRSHQDKLARALATAIVQYFEDNPPEG 406
             A+  VL+SPD+PS+LVET FISNP+EE+ L   +HQ +LA A+   +  YFE  PP G
Sbjct: 355 ERANFVVLRSPDVPSILVETAFISNPAEERKLRDPTHQKRLAEAVMGGVRNYFESTPPPG 414

Query: 407 TLFANRGKAQK---------------------------------HKVQRGESIGLIANQY 433
           T FA     +                                  HKV RGES+  IA QY
Sbjct: 415 TWFAAEAARRNGVQLASAAGSGDGEAVASADRSAPRAQAAAHDVHKVGRGESLSSIAKQY 474

Query: 434 GVSVDALKKANNLKSSTISVGQLLTIPA 461
           GVSV ALK AN + S+T+  G  LTIPA
Sbjct: 475 GVSVGALKNANQINSNTVRAGTTLTIPA 502



 Score = 45.8 bits (107), Expect = 4e-09
 Identities = 22/43 (51%), Positives = 29/43 (67%)

Query: 537 HKVQRGEFLSKIADQYNVSVDSIRQANQLRTDQLLVGQQLIIP 579
           HKV RGE LS IA QY VSV +++ ANQ+ ++ +  G  L IP
Sbjct: 459 HKVGRGESLSSIAKQYGVSVGALKNANQINSNTVRAGTTLTIP 501