Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Sphingobium sp. HT1-2

 Score =  130 bits (327), Expect = 1e-34
 Identities = 104/329 (31%), Positives = 155/329 (47%), Gaps = 23/329 (6%)

Query: 79  STSRAKLPVNVTESGILSKVRASSPPEKSTFRLVFELKQKTTPTLFKLAPTPGGQYGHRL 138
           S + A++ +++T    L   + ++  +  +F L     Q  T   F+ A   G     RL
Sbjct: 100 SDTMARIVLDLTTPATLGDPQIAADGKSLSFSL-----QNVTDGRFRTAVGQG-----RL 149

Query: 139 VIDMPHGKVSESS----SASTPSSPAQVSKDASQLLGNDD---IVVAIDAGHGGEDPGSI 191
             D P    +       S + P  P     D   + G  D    +V IDAGHGG DPG+I
Sbjct: 150 RFDAPANMSARPQKRIHSITVPIPPVARGVDLPAIEGVRDGSRPLVVIDAGHGGHDPGAI 209

Query: 192 GPTR-KYEKDITLSVSKKLADQLNAVPGMKAVLTRRGDYFVNLNKRTEIARRSKAHLLVS 250
                K EKD+TL++++ + DQL     ++  LTR  D F+ L +R  IAR+  A L +S
Sbjct: 210 NKDNGKREKDVTLAIAQAIRDQLVKSGRVRVALTRDDDRFLVLQERYGIARKLGADLFIS 269

Query: 251 VHADAFHTPQPRGGSVFVLNTRRANTEIARWVENHEQQSELLGGAGEVLSKTNNDRNVSQ 310
           VHAD+       G +V+ L+   ++ E AR +   E ++++L G    ++  N   +VS 
Sbjct: 270 VHADSAENADAHGATVYTLSETASDREAAR-LAARENKADVLNG----VNLGNQSGDVSS 324

Query: 311 TLLDLQFSHSQKEGYKVATNILREMGKVAHLHKTEPVNASLAVLKSPDIPSVLVETGFIS 370
            L+DL    S       A  + RE              ASL VLK+PD PSVL ETG+IS
Sbjct: 325 ILIDLTQRESMNISANFARLLQREAAPYVPFRSAYHRCASLMVLKAPDTPSVLFETGYIS 384

Query: 371 NPSEEKLLIQRSHQDKLARALATAIVQYF 399
           N  +   L     Q  +AR +A AI  +F
Sbjct: 385 NADDALFLSSHEGQQAIARGVARAIDVHF 413