Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 762 a.a., lytic transglycosylase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 62.8 bits (151), Expect = 5e-14
 Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 24/193 (12%)

Query: 413 GKAQKHKVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQ-LLTIPASSAPNPV--- 468
           G    H V++GE++  I+  Y V+V+ L   NNL  + + +GQ LL       P P    
Sbjct: 570 GTPTTHVVKQGETLYGISRMYAVTVNDLATWNNLGDTPLKMGQELLVAEPQMQPEPAATA 629

Query: 469 ------PVPVMANPVETETITHVVKTGDFLGKLATTYKVSVASIKKENNLKSDTLVLGQK 522
                    V A  + T +  H V  G+ L +++  Y V +  +++ N+L  +++ LGQ+
Sbjct: 630 EAVAEDAAEVPATLLSTSSPYHKVAAGETLYQISKKYNVLLEELRQWNSLADNSIQLGQE 689

Query: 523 LKI--TVSLKDKPLRK------------HKVQRGEFLSKIADQYNVSVDSIRQANQLRTD 568
           L+I    +    P  +            H V  GE + +I+ +Y V++  I + N     
Sbjct: 690 LRIKAPATTTAAPASEEAAAPAGNSRVYHTVAGGESMYQISRKYGVTIKDIMEWNNKSDF 749

Query: 569 QLLVGQQLIIPNK 581
            + VG++L+I  K
Sbjct: 750 SVSVGEKLLIKQK 762



 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 458 TIPASSAPNPVPVPVMANPVETETITHVVKTGDFLGKLATTYKVSVASIKKENNLKSDTL 517
           T P+++ P   P P       T T THVVK G+ L  ++  Y V+V  +   NNL    L
Sbjct: 551 TFPSTAPPAATPAPAQKQ-TGTPT-THVVKQGETLYGISRMYAVTVNDLATWNNLGDTPL 608

Query: 518 VLGQKL-----------------------KITVSLKDKPLRKHKVQRGEFLSKIADQYNV 554
            +GQ+L                       ++  +L       HKV  GE L +I+ +YNV
Sbjct: 609 KMGQELLVAEPQMQPEPAATAEAVAEDAAEVPATLLSTSSPYHKVAAGETLYQISKKYNV 668

Query: 555 SVDSIRQANQLRTDQLLVGQQLII 578
            ++ +RQ N L  + + +GQ+L I
Sbjct: 669 LLEELRQWNSLADNSIQLGQELRI 692



 Score = 56.6 bits (135), Expect = 4e-12
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 5/152 (3%)

Query: 375 EKLLIQRSHQDKLARALATAIVQYFEDNPPEGTLFANRGKAQKHKVQRGESIGLIANQYG 434
           ++LL+          A A A+ +   + P   TL +    +  HKV  GE++  I+ +Y 
Sbjct: 612 QELLVAEPQMQPEPAATAEAVAEDAAEVP--ATLLST--SSPYHKVAAGETLYQISKKYN 667

Query: 435 VSVDALKKANNLKSSTISVGQLLTIPASSAPNPVPV-PVMANPVETETITHVVKTGDFLG 493
           V ++ L++ N+L  ++I +GQ L I A +     P     A P     + H V  G+ + 
Sbjct: 668 VLLEELRQWNSLADNSIQLGQELRIKAPATTTAAPASEEAAAPAGNSRVYHTVAGGESMY 727

Query: 494 KLATTYKVSVASIKKENNLKSDTLVLGQKLKI 525
           +++  Y V++  I + NN    ++ +G+KL I
Sbjct: 728 QISRKYGVTIKDIMEWNNKSDFSVSVGEKLLI 759



 Score = 31.6 bits (70), Expect = 1e-04
 Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 10/135 (7%)

Query: 342 HKTEPVNASLAVLKSPDIPSVLVETGFISNPSEEKLLIQRSHQDKLARALATAIVQYFED 401
           H+     AS A++K  ++ +++   G     +++KL +Q     +  R L    +  F+ 
Sbjct: 288 HQAGTRKASAAMVKRNNLNALVAREG----DTKDKLALQAGISTR--RFLKYNDMYSFDK 341

Query: 402 NPPEGTLFANRGKA----QKHKVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQLL 457
             P    +  + +     + H VQ GE++ +I+  YGV +  L   N +K + + V   +
Sbjct: 342 VAPGTAYYIEKKRTSADTEYHVVQPGETMQMISQHYGVRLGWLLFKNRMKRNEVPVPGRV 401

Query: 458 TIPASSAPNPVPVPV 472
                  P   PV V
Sbjct: 402 LWLQKRRPGSTPVEV 416