Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., lytic transglycosylase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 60.8 bits (146), Expect = 1e-13
 Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 33/162 (20%)

Query: 449 STISVGQLLTIPASSAPNPVPVPVMANPVETET------------ITHVVKTGDFLGKLA 496
           S I +     +P +  P P   PVM    +TE             +T+ V+ GD L ++A
Sbjct: 345 SCIMLAAAPVVPHTKDPEP-ETPVMFASAKTEQAAEKKEAPAVAKVTYTVQPGDNLTQIA 403

Query: 497 TTYKVSVASIKKENNLKSDTLVLGQKLKI----------TVSLKDKPLRK---------H 537
             + V+V  +K+ NNLKS +L+  Q+L +           ++ K KP  K         +
Sbjct: 404 KRHDVTVEQLKEWNNLKSSSLMPKQELLVMQQAEAGAVLALNTKGKPEAKSAVEKKELIY 463

Query: 538 KVQRGEFLSKIADQYN-VSVDSIRQANQLRTDQLLVGQQLII 578
            VQ G+ L  I+ +YN +SV+ I++ N+LR++++  GQ+LI+
Sbjct: 464 HVQPGDTLWNISKKYNGISVEQIKKLNRLRSNEIKPGQKLIL 505



 Score = 58.9 bits (141), Expect = 5e-13
 Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 21/173 (12%)

Query: 372 PSEEKLLIQRSHQDKLARALATAIVQYFEDNPPEGTLFANRGKAQK-------------- 417
           P+    L+  +         A  +V + +D  PE  +     K ++              
Sbjct: 331 PASRSALLATADDKSCIMLAAAPVVPHTKDPEPETPVMFASAKTEQAAEKKEAPAVAKVT 390

Query: 418 HKVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQLLTI------PASSAPNPVPVP 471
           + VQ G+++  IA ++ V+V+ LK+ NNLKSS++   Q L +       A  A N    P
Sbjct: 391 YTVQPGDNLTQIAKRHDVTVEQLKEWNNLKSSSLMPKQELLVMQQAEAGAVLALNTKGKP 450

Query: 472 VMANPVETETITHVVKTGDFLGKLATTYK-VSVASIKKENNLKSDTLVLGQKL 523
              + VE + + + V+ GD L  ++  Y  +SV  IKK N L+S+ +  GQKL
Sbjct: 451 EAKSAVEKKELIYHVQPGDTLWNISKKYNGISVEQIKKLNRLRSNEIKPGQKL 503



 Score = 35.8 bits (81), Expect = 4e-06
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 10/89 (11%)

Query: 372 PSEEKLLIQRSHQDKLARALATAIVQYFEDNPPEGTLFANRGKAQKHKVQRGESIGLIAN 431
           P +E L++Q++         A A++       PE      + +   H VQ G+++  I+ 
Sbjct: 426 PKQELLVMQQAE--------AGAVLALNTKGKPEAKSAVEKKELIYH-VQPGDTLWNISK 476

Query: 432 QY-GVSVDALKKANNLKSSTISVGQLLTI 459
           +Y G+SV+ +KK N L+S+ I  GQ L +
Sbjct: 477 KYNGISVEQIKKLNRLRSNEIKPGQKLIL 505