Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  274 bits (701), Expect = 5e-78
 Identities = 156/405 (38%), Positives = 236/405 (58%), Gaps = 29/405 (7%)

Query: 25  LLAIAPQTWANVLEGVRVWPSPDETRVVLDVKSEVDYSYFTLSSPERLVVDLKQSTSRAK 84
           L+ +  Q  A  L  ++V     + R+ L    E +Y+Y +      + +D++Q+     
Sbjct: 13  LILLCAQAGAASLSDIQVSNGEQQARITLSFIGEPEYAY-SQDGKRTVALDIRQTGVIQG 71

Query: 85  LPVNVTESGILSKVRASSPPEKSTFRLVFELKQKTTPTLFKLAPTPGGQYGHRLVIDM-- 142
           LP+  + + ++  +RA +P +  + RL+ +L +       K     GG Y     I+   
Sbjct: 72  LPLQFSGNNLVKTIRAGTPKDAQSLRLLVDLTENGKTEAVKRQN--GGNYTVIFTINADV 129

Query: 143 ----PHGKVSESSSASTPSSPAQ------------------VSKDASQLLGN--DDIVVA 178
               P        SA  P+ PA+                  V++ A++      D +V+A
Sbjct: 130 PPPPPPVVAKRVESAPRPTEPARNPFKSSDDRLTGVTSSNTVTRPAARASAGAGDKVVIA 189

Query: 179 IDAGHGGEDPGSIGPTRKYEKDITLSVSKKLADQLNAVPGMKAVLTRRGDYFVNLNKRTE 238
           IDAGHGG+DPG+IGP    EK++T+++++KL   LN  P  K VLTR GDYF+++  R++
Sbjct: 190 IDAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNNDPMFKGVLTRDGDYFISVMGRSD 249

Query: 239 IARRSKAHLLVSVHADAFHTPQPRGGSVFVLNTRRANTEIARWVENHEQQSELLGGAGEV 298
           +AR+  A+ LVS+HADA       G SV+VL+ RRAN+E+A W+E HE+QSELLGGAG+V
Sbjct: 250 VARKQNANFLVSIHADAAPNRDATGASVWVLSNRRANSEMANWLEQHEKQSELLGGAGDV 309

Query: 299 LSKTNNDRNVSQTLLDLQFSHSQKEGYKVATNILREMGKVAHLHKTEPVNASLAVLKSPD 358
           L+ + +D  +SQ +LDLQF HSQ+ GY VATN+L ++  V  LHK  P +ASL VL+SPD
Sbjct: 310 LANSQSDPYLSQAVLDLQFGHSQRVGYDVATNVLSQLDGVGSLHKRRPEHASLGVLRSPD 369

Query: 359 IPSVLVETGFISNPSEEKLLIQRSHQDKLARALATAIVQYFEDNP 403
           IPS+LVETGFISN  EE+LL    +Q ++A A+   + +YF  +P
Sbjct: 370 IPSILVETGFISNHGEERLLASDRYQQQIADAIYRGLRKYFAAHP 414