Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  153 bits (387), Expect = 8e-42
 Identities = 89/237 (37%), Positives = 137/237 (57%), Gaps = 6/237 (2%)

Query: 163 SKDASQLLGNDDIVVAIDAGHGGEDPGSIGPTRKYEKDITLSVSKKLADQLNAVPGMKAV 222
           SK  ++  G+  +V+ +D GHGG D G+IG     EK + L+++K +   L    G+ A 
Sbjct: 46  SKPKTKKTGSKRLVM-LDPGHGGIDTGAIGRNGSQEKHVVLAIAKNVRAILRN-HGIDAR 103

Query: 223 LTRRGDYFVNLNKRTEIARRSKAHLLVSVHADAFHTPQPRGGSVFVLNTRRANTEIARWV 282
           LTR GD F+ L  R EIA +  A L +S+HAD F  P+  G SVF L+ R A++ +A+++
Sbjct: 104 LTRTGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMAKYL 163

Query: 283 ENHEQQSELLGGAGEVLSKTNNDRNVSQTLLDLQFSHSQKEGYKVATNILREMGKVAHLH 342
              E +++ + G       T+ D  + Q L DL  + + K    + ++IL+++  +  LH
Sbjct: 164 SERENRADEVAGK----KATDRDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPIHKLH 219

Query: 343 KTEPVNASLAVLKSPDIPSVLVETGFISNPSEEKLLIQRSHQDKLARALATAIVQYF 399
                 A+  VLKSP IPSVLVET FI+NP EE+LL   + + K+A A+A  I+ YF
Sbjct: 220 SRTTEQAAFVVLKSPSIPSVLVETSFITNPEEERLLGTTAFRQKIATAIANGIISYF 276