Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., N-acetylmuramoyl-l-alanine amidase I (NCBI) from Escherichia coli BW25113

 Score =  154 bits (390), Expect = 3e-42
 Identities = 86/224 (38%), Positives = 130/224 (58%), Gaps = 5/224 (2%)

Query: 176 VVAIDAGHGGEDPGSIGPTRKYEKDITLSVSKKLADQLNAVPGMKAVLTRRGDYFVNLNK 235
           VV +D GHGG D G+IG     EK + L+++K +   L    G+ A LTR GD F+ L  
Sbjct: 58  VVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRN-HGIDARLTRSGDTFIPLYD 116

Query: 236 RTEIARRSKAHLLVSVHADAFHTPQPRGGSVFVLNTRRANTEIARWVENHEQQSELLGGA 295
           R EIA +  A L +S+HAD F  P+  G SVF L+ R A++ +A+++   E +++ + G 
Sbjct: 117 RVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMAKYLSERENRADEVAGK 176

Query: 296 GEVLSKTNNDRNVSQTLLDLQFSHSQKEGYKVATNILREMGKVAHLHKTEPVNASLAVLK 355
                 T+ D  + Q L DL  + + K    + ++IL+++  V  LH      A+  VLK
Sbjct: 177 ----KATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVVLK 232

Query: 356 SPDIPSVLVETGFISNPSEEKLLIQRSHQDKLARALATAIVQYF 399
           SP +PSVLVET FI+NP EE+LL   + + K+A A+A  ++ YF
Sbjct: 233 SPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYF 276