Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., N-acetylmuramoyl-L-alanine amidase AmiB from Escherichia coli ECRC102

 Score =  273 bits (699), Expect = 8e-78
 Identities = 157/410 (38%), Positives = 239/410 (58%), Gaps = 33/410 (8%)

Query: 25  LLAIAPQTWANVLEGVRVWPSPDETRVVLDVKSEVDYSYFTLSSPERLVVDLKQSTSRAK 84
           LL +  Q  A  L  ++V     + R+ L    + DY+ F+  S   + +D+KQ+     
Sbjct: 13  LLLLCAQVGAATLSDIQVSNGNQQARITLSFIGDPDYA-FSHQSKRTVALDIKQTGVIQG 71

Query: 85  LPVNVTESGILSKVRASSPPEKSTFRLVFELKQK-------------------------- 118
           LP+  + + ++  +R+ +P +  T RLV +L +                           
Sbjct: 72  LPLLFSGNNLVKAIRSGTPKDAQTLRLVVDLTENGKTEAVKRQNGSNYTVVFTINADAPP 131

Query: 119 ---TTPTLFKLAPTPGGQYGHRLVIDMPHGKVSESSSASTPSSPAQVSKDASQLLGN--D 173
                P + K   TP      R+     +   +ES+  +   S   V++ A++   N  D
Sbjct: 132 PPPPPPVVVKRVETPT-VVAPRVSEPARNPFKTESNRTTGVISSNTVTRPAARATANNGD 190

Query: 174 DIVVAIDAGHGGEDPGSIGPTRKYEKDITLSVSKKLADQLNAVPGMKAVLTRRGDYFVNL 233
            I++AIDAGHGG+DPG+IGP    EK++T+++++KL   LN  P  K VLTR GDYF+++
Sbjct: 191 KIIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDDPMFKGVLTRDGDYFISV 250

Query: 234 NKRTEIARRSKAHLLVSVHADAFHTPQPRGGSVFVLNTRRANTEIARWVENHEQQSELLG 293
             R+++AR+  A+ LVS+HADA       G SV+VL+ RRAN+E+A W+E HE+QSELLG
Sbjct: 251 MGRSDVARKQNANFLVSIHADAAPNRSATGASVWVLSNRRANSEMASWLEQHEKQSELLG 310

Query: 294 GAGEVLSKTNNDRNVSQTLLDLQFSHSQKEGYKVATNILREMGKVAHLHKTEPVNASLAV 353
           GAG+VL+ + +D  +SQ +LDLQF HSQ+ GY VAT+++ ++ ++  +HK  P +ASL V
Sbjct: 311 GAGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEIHKRRPEHASLGV 370

Query: 354 LKSPDIPSVLVETGFISNPSEEKLLIQRSHQDKLARALATAIVQYFEDNP 403
           L+SPDIPSVLVETGFISN SEE+LL    +Q +LA A+   +  YF  +P
Sbjct: 371 LRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNYFLAHP 420