Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., N-acetylmuramoyl-L-alanine amidase from Dickeya dianthicola ME23

 Score =  222 bits (565), Expect = 3e-62
 Identities = 140/385 (36%), Positives = 203/385 (52%), Gaps = 29/385 (7%)

Query: 34  ANVLEGVRVWPSPDETRVVLDVKSEVDYSYFTLSSPERLVVDLKQSTSRAKLPVNVTE-- 91
           A+ +  VRVWPS   +RV L+    + Y  F L +PERLVVD++ ++  + L     +  
Sbjct: 33  ASQVIAVRVWPSSAYSRVTLESSQPLKYRQFMLENPERLVVDIENASLNSVLKNAARQFE 92

Query: 92  -SGILSKVRASSPPEKSTFRLVFELKQKTTPTLFKLAPTPGGQYGHRLVIDMPHGKVSES 150
                 K   +   +K+T RLV EL+QK  P LF LAP  G  + +RLV+D+ +      
Sbjct: 93  RPDPFIKTARAGQFDKNTVRLVLELRQKVNPKLFTLAPVAG--FRNRLVMDL-YPAAGRY 149

Query: 151 SSASTP---------------SSPAQVSKDASQLLGND-DIVVAIDAGHGGEDPGSIGPT 194
             A  P               + P +  KD     G +  +V+ +D GHGGEDPG+IG  
Sbjct: 150 DDADDPLLALLEDYNKGDLERTLPPERPKDGKA--GRERPLVIMLDPGHGGEDPGAIGKN 207

Query: 195 RKYEKDITLSVSKKLADQLNAVPGMKAVLTRRGDYFVNLNKRTEIARRSKAHLLVSVHAD 254
           R  EKD+ L ++++L   +     MK  +TR  D F+ LN R   AR+ +A L VS+HAD
Sbjct: 208 RTREKDVVLQIARRLKALIERERNMKVYMTRNEDVFIPLNVRVAKARKQRADLFVSIHAD 267

Query: 255 AFHTPQPRGGSVFVLNTRRANTEIARWVENHEQQSELLGGAGEVLSKTNNDRNVSQTLLD 314
           AF     RG SVF L+ + A +  AR++   + +S+L+GG        + DR +  T+ D
Sbjct: 268 AFSNRAARGSSVFALSKKGATSSAARYLAQTQNESDLIGGV-----SLSGDRYLDSTMFD 322

Query: 315 LQFSHSQKEGYKVATNILREMGKVAHLHKTEPVNASLAVLKSPDIPSVLVETGFISNPSE 374
           +  + +  +  K    IL  +GKV HLHK     A  AVLK+PDIPSVLVET FISN  E
Sbjct: 323 MVQTVTINDSLKFGKEILHRLGKVNHLHKNGVDQAGFAVLKAPDIPSVLVETAFISNLEE 382

Query: 375 EKLLIQRSHQDKLARALATAIVQYF 399
           E+ L     Q ++A+++   I  YF
Sbjct: 383 ERRLRTSRFQQQVAQSILEGIKAYF 407