Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., N-acetylmuramoyl-L-alanine amidase from Dickeya dadantii 3937

 Score =  222 bits (566), Expect = 2e-62
 Identities = 145/405 (35%), Positives = 206/405 (50%), Gaps = 40/405 (9%)

Query: 25  LLAIAPQTWANVLEG-----------VRVWPSPDETRVVLDVKSEVDYSYFTLSSPERLV 73
           LL  A  TW   + G           VRVWPS   +RV L+    + Y  F L +PERLV
Sbjct: 13  LLQGAAATWLLSISGIGLAAVSQVLAVRVWPSSSYSRVTLESSQPLKYRQFMLENPERLV 72

Query: 74  VDLKQSTSRAKLPV---NVTESGILSKVRASSPPEKSTFRLVFELKQKTTPTLFKLAPTP 130
           VD++ ++  + L              K   +   +K+T RLV EL+QK  P LF LAP  
Sbjct: 73  VDIENASLNSVLKNAGRQFERPDPFIKTARAGQFDKNTVRLVLELRQKVNPKLFTLAPVA 132

Query: 131 GGQYGHRLVIDMPHGKVSESSSASTP---------------SSPAQVSKDASQLLGND-D 174
           G  + +RLV+D+ +   S    A  P               + P +  KD     G +  
Sbjct: 133 G--FRNRLVMDL-YPAASRYDEADDPLLALLEDYNKGELERTLPPERPKDGKA--GRERP 187

Query: 175 IVVAIDAGHGGEDPGSIGPTRKYEKDITLSVSKKLADQLNAVPGMKAVLTRRGDYFVNLN 234
           +V+ +D GHGGEDPG+IG  R  EKD+ L ++++L   +     MK  +TR  D F+ L 
Sbjct: 188 LVIMLDPGHGGEDPGAIGKNRTREKDVVLQIARRLKALIERERNMKVYMTRNEDVFIPLK 247

Query: 235 KRTEIARRSKAHLLVSVHADAFHTPQPRGGSVFVLNTRRANTEIARWVENHEQQSELLGG 294
            R   AR+ +A L VS+HADAF     RG SVF L+ + A +  AR++   + +S+L+GG
Sbjct: 248 VRVAKARKQRADLFVSIHADAFSNRAARGSSVFALSKKGATSSAARYLAQTQNESDLIGG 307

Query: 295 AGEVLSKTNNDRNVSQTLLDLQFSHSQKEGYKVATNILREMGKVAHLHKTEPVNASLAVL 354
                   + DR +  T+ D+  + +  +  K    IL  +GKV HLHK     A  AVL
Sbjct: 308 V-----SLSGDRYLDSTMFDMVQTLTINDSLKFGKEILHRLGKVNHLHKNSVDQAGFAVL 362

Query: 355 KSPDIPSVLVETGFISNPSEEKLLIQRSHQDKLARALATAIVQYF 399
           K+PDIPSVLVET FISN  EE+ L     Q ++A+++   I  YF
Sbjct: 363 KAPDIPSVLVETAFISNLEEERKLRTSRFQQQVAQSILEGIKAYF 407