Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., N-acetylmuramoyl-L-alanine amidase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  135 bits (339), Expect = 4e-36
 Identities = 108/364 (29%), Positives = 170/364 (46%), Gaps = 22/364 (6%)

Query: 40  VRVWPSPDETRVVLDVKSEVDYSYFTLSSPERLVVDLKQSTSRAKLPVNVTESGILSKVR 99
           VR     D TRVV+D+               R+V+ L        L  N   SG++    
Sbjct: 31  VRFGADGDRTRVVIDLNKTAQGRVIDAGGEGRVVLALSGVAPGRGL--NGGGSGLVRSYE 88

Query: 100 ASSPPEKSTFRLVFELKQKTTPTLFKLAPTPGGQYGHRLVIDMPH-GKVSESSSASTPSS 158
            +S    S  R+  EL + +      L P   G   +R V+D+   G  + +S+   P +
Sbjct: 89  VTSSGGSS--RVQLELARGSEIERRFLLPPGDGVSHYRYVVDLKATGAAARASTTPAPRA 146

Query: 159 PAQVSKDASQLLGNDDIVVAIDAGHGGEDPGSIGPTRKYEKDITLSVSKKLADQLNAVPG 218
            A   +    L       + IDAGHGG DPG+ G + + EK +TL+ +  L  +L     
Sbjct: 147 SAPPRRAERPL-------IVIDAGHGGNDPGASGASAQ-EKQVTLAAALALKAELEKNGR 198

Query: 219 MKAVLTRRGDYFVNLNKRTEIARRSKAHLLVSVHADAFHTPQPRGGSVFVLNTRRANTEI 278
            +  LTR  D +V+L +R  IAR++ A L +S+HADA   P  RG SV+ L+ + A   +
Sbjct: 199 YRVRLTRTDDRYVDLYRRVSIARQADADLFISLHADAGADPALRGASVYTLSEQGAGRAV 258

Query: 279 ARWVENHEQQSELLGGAGEVLSKTNNDRNVSQTLLDLQFSHSQKEGYKVATNILREMGKV 338
             +        E        L     D +V + LLD+    +Q    + A  +L  +   
Sbjct: 259 REFTRGDNWHRE--------LHLPGRDPSVDRILLDMTQRATQNRSAQFARVLLTHLEGS 310

Query: 339 AH-LHKTEPVNASLAVLKSPDIPSVLVETGFISNPSEEKLLIQRSHQDKLARALATAIVQ 397
            H L +    +A LAVL +PD+P+VL+E GFI+NP +E+LL     + +L +++A  I +
Sbjct: 311 DHPLLRRSHRDAGLAVLLAPDVPAVLLEMGFITNPEDERLLTDERARRRLMKSVADGIDR 370

Query: 398 YFED 401
           YF +
Sbjct: 371 YFRE 374