Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., N-acetylmuramoyl-l-alanine amidase II from Escherichia coli BL21

 Score =  271 bits (694), Expect = 3e-77
 Identities = 157/409 (38%), Positives = 238/409 (58%), Gaps = 31/409 (7%)

Query: 25  LLAIAPQTWANVLEGVRVWPSPDETRVVLDVKSEVDYSYFTLSSPERLVVDLKQSTSRAK 84
           LL +     A  L  ++V     + R+ L    + DY+ F+  S   + +D+KQ+     
Sbjct: 13  LLLLCTPVGAATLSDIQVSNGNQQARITLSFIGDPDYA-FSHQSKRTVALDIKQTGVIQG 71

Query: 85  LPVNVTESGILSKVRASSPPEKSTFRLVFELKQKTTPTLFKLAPTPGGQYGHRLVIDMPH 144
           LP+  + + ++  +R+ +P +  T RLV +L +       K            +  D+P 
Sbjct: 72  LPLLFSGNNLVKAIRSGTPKDAQTLRLVVDLTENGKTEAVKRQNGSNYNVVFTINADVPP 131

Query: 145 --------GKVSESSSASTP--SSPAQ------------------VSKDASQLLGN--DD 174
                    K  E+ +   P  S PA+                  V++ A++   N  D 
Sbjct: 132 PPPPPPVVAKRVETPAVVAPRVSEPARNPFKTESNRTTGVISSNTVTRPAARATANTGDK 191

Query: 175 IVVAIDAGHGGEDPGSIGPTRKYEKDITLSVSKKLADQLNAVPGMKAVLTRRGDYFVNLN 234
           I++AIDAGHGG+DPG+IGP    EK++T+++++KL   LN  P  K VLTR GDYF+++ 
Sbjct: 192 IIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDDPMFKGVLTRDGDYFISVM 251

Query: 235 KRTEIARRSKAHLLVSVHADAFHTPQPRGGSVFVLNTRRANTEIARWVENHEQQSELLGG 294
            R+++AR+  A+ LVS+HADA       G SV+VL+ RRAN+E+A W+E HE+QSELLGG
Sbjct: 252 GRSDVARKQNANFLVSIHADAAPNRSATGASVWVLSNRRANSEMASWLEQHEKQSELLGG 311

Query: 295 AGEVLSKTNNDRNVSQTLLDLQFSHSQKEGYKVATNILREMGKVAHLHKTEPVNASLAVL 354
           AG+VL+ + +D  +SQ +LDLQF HSQ+ GY VAT+++ ++ ++  +HK  P +ASL VL
Sbjct: 312 AGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEIHKRRPEHASLGVL 371

Query: 355 KSPDIPSVLVETGFISNPSEEKLLIQRSHQDKLARALATAIVQYFEDNP 403
           +SPDIPSVLVETGFISN SEE+LL    +Q +LA A+   +  YF  +P
Sbjct: 372 RSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNYFLAHP 420