Pairwise Alignments

Query, 581 a.a., N-acetylmuramoyl-L-alanine amidase from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., Membrane-bound lytic murein transglycosylase D precursor from Alteromonas macleodii MIT1002

 Score = 74.3 bits (181), Expect = 1e-17
 Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 18/176 (10%)

Query: 417 KHKVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQLLTIPA--------SSAPNPV 468
           +H V+ G+S+G IA QY  +V  LKK N L SS I VGQ + +P         + +    
Sbjct: 368 RHSVKPGDSLGKIAKQYHTTVKVLKKVNELDSSMIRVGQAIMVPVALQELDSYTLSQEQR 427

Query: 469 PVPVMANPVETETITHVVKTGDFLGKLATTYKVSVASIKKENNL-------KSDTLVLGQ 521
              +       + + H V++GD L  +A  Y +    + K N +          TLV+ Q
Sbjct: 428 LASLQNGNTSKQKVRHTVQSGDTLWDIARKYNIGTKQLAKWNGMAPGDMLHPGKTLVIWQ 487

Query: 522 KLKITVSLKDKPLRKHKVQRGEFLSKIADQYNVSVDSIRQANQLRTDQLL-VGQQL 576
           + K    +  K    + V+ G+ LS+IA ++NV V  I + N L T + L  GQ+L
Sbjct: 488 EGKAQDGVTKKV--TYTVRNGDSLSRIASKFNVRVSDIGKWNSLNTKRYLQPGQKL 541



 Score = 52.8 bits (125), Expect = 4e-11
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 22/119 (18%)

Query: 482 ITHVVKTGDFLGKLATTYKVSVASIKKENNLKSDTLVLGQKLKITVSLKD---------- 531
           + H VK GD LGK+A  Y  +V  +KK N L S  + +GQ + + V+L++          
Sbjct: 367 VRHSVKPGDSLGKIAKQYHTTVKVLKKVNELDSSMIRVGQAIMVPVALQELDSYTLSQEQ 426

Query: 532 -----------KPLRKHKVQRGEFLSKIADQYNVSVDSIRQANQLRT-DQLLVGQQLII 578
                      K   +H VQ G+ L  IA +YN+    + + N +   D L  G+ L+I
Sbjct: 427 RLASLQNGNTSKQKVRHTVQSGDTLWDIARKYNIGTKQLAKWNGMAPGDMLHPGKTLVI 485



 Score = 40.4 bits (93), Expect = 2e-07
 Identities = 16/44 (36%), Positives = 30/44 (68%)

Query: 536 KHKVQRGEFLSKIADQYNVSVDSIRQANQLRTDQLLVGQQLIIP 579
           +H V+ G+ L KIA QY+ +V  +++ N+L +  + VGQ +++P
Sbjct: 368 RHSVKPGDSLGKIAKQYHTTVKVLKKVNELDSSMIRVGQAIMVP 411



 Score = 25.4 bits (54), Expect = 0.006
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 8/66 (12%)

Query: 402 NPPEGTLFANRGKAQK-------HKVQRGESIGLIANQYGVSVDALKKANNLKSST-ISV 453
           +P +  +    GKAQ        + V+ G+S+  IA+++ V V  + K N+L +   +  
Sbjct: 478 HPGKTLVIWQEGKAQDGVTKKVTYTVRNGDSLSRIASKFNVRVSDIGKWNSLNTKRYLQP 537

Query: 454 GQLLTI 459
           GQ L +
Sbjct: 538 GQKLKL 543