Pairwise Alignments

Query, 478 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., Putative transport protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 65.9 bits (159), Expect = 4e-15
 Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)

Query: 109 FSAFSSPIIILFMGGFALAIAASKYELDNNLARVLLKPFGHQPKYIMLG-LMLITSVFSM 167
           + A   P IIL +G    A+A  K    + + + L+   G    Y+MLG L ++ +V  +
Sbjct: 460 YKAIHWPSIILIVGMMPFALALQKTGGVSLVVQGLMDIGGGYGPYMMLGCLFVLCAVIGL 519

Query: 168 FMSNTATTVMMLALLGPIVASAPKGDLGIKALVLCIPIA-ANTGGIATPIGTPPNAIALQ 226
           F+SNTAT V+M     PI  +A K  +G+      + +A A +    TP+ +P N + L 
Sbjct: 520 FISNTATAVLM----APIALAAAK-SMGVSPYPFAMAVAMAASAAFMTPVSSPVNTLVL- 573

Query: 227 YLTGENSIDFLSWMMMGLPFVLVQLTIAWFLLQKLFP 263
              G  +  F  ++ +G+PF L+ + +   ++  LFP
Sbjct: 574 ---GPGNYSFSDFVKLGVPFTLIVMAVCIVMIPMLFP 607



 Score = 62.0 bits (149), Expect = 5e-14
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 14/173 (8%)

Query: 314 PLAVFTLTGIMGK-------EELKQINWDVLWLVAGGIAIGIGLEQTGLAQALAHSIDY- 365
           P+A      +MGK          K I+W  + L+ G +   + L++TG    +   +   
Sbjct: 438 PIAAIIACLLMGKFRCIDAESAYKAIHWPSIILIVGMMPFALALQKTGGVSLVVQGLMDI 497

Query: 366 -QSLSPMLIVIALSLVCWLMANFMSNTATANLIMPIAAAIGTSMSSLEQVGGLQALLVVV 424
                P +++  L ++C ++  F+SNTATA L+ PIA A   SM             + V
Sbjct: 498 GGGYGPYMMLGCLFVLCAVIGLFISNTATAVLMAPIALAAAKSMGV-----SPYPFAMAV 552

Query: 425 AFSASLGMILPVSTPPNSLAYSTGLIESKDMAKTGLVIGGIGLGIVYLMVFLL 477
           A +AS   + PVS+P N+L    G     D  K G+    I + +  +M+ +L
Sbjct: 553 AMAASAAFMTPVSSPVNTLVLGPGNYSFSDFVKLGVPFTLIVMAVCIVMIPML 605



 Score = 47.4 bits (111), Expect = 1e-09
 Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 15/191 (7%)

Query: 291 ALTIVLWMTTSWHGMNTYVVAIIPLAVFTLTGIMG-KEELKQINWDVLWLVAGGIAIGIG 349
           A+ +VL+ T     +    VA+  +  F L+G +   E     +   + L+A    IG G
Sbjct: 13  AIAVVLFATGK---VRMDAVALFVIVAFVLSGTLTLPEAFSGFSDPNVILIAALFIIGDG 69

Query: 350 LEQTGLAQALAH-SIDYQSLSPMLIVIALSLVCWLMANFMSNTATANLIMPIAAAIGTSM 408
           L +TG+A  +    +     S + +++ L +    +  FMS+T    + +P+  ++   M
Sbjct: 70  LVRTGVATVVGTWLVKMAGSSEIKMLVLLMITVAGLGAFMSSTGVVAIFIPVVLSVSMHM 129

Query: 409 SSLEQVGGLQALLVVVAFSASL-GMILPVSTPPNSLAYS----TGLIESKDMAKTGLVIG 463
            +         L++ ++F+  + GM+  V+TPPN +  S     GL      + T L + 
Sbjct: 130 QT-----SPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGLHGFNFFSVTPLGVV 184

Query: 464 GIGLGIVYLMV 474
            + LGIVY++V
Sbjct: 185 VLALGIVYMLV 195



 Score = 43.9 bits (102), Expect = 2e-08
 Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 5/170 (2%)

Query: 99  LGELLKYTDIFSAFSSPIIILFMGGFALAIAASKYELDNNLARVLLKPFGHQPKYIMLGL 158
           L   L   + FS FS P +IL    F +     +  +   +   L+K  G     +++ L
Sbjct: 39  LSGTLTLPEAFSGFSDPNVILIAALFIIGDGLVRTGVATVVGTWLVKMAGSSEIKMLVLL 98

Query: 159 MLITSVFSMFMSNTATTVMMLALLGPIVASAPKG-DLGIKALVLCIPIAANTGGIATPIG 217
           M+  +    FMS+T     ++A+  P+V S           L++ +  A    G+ T + 
Sbjct: 99  MITVAGLGAFMSSTG----VVAIFIPVVLSVSMHMQTSPSRLMMPLSFAGLISGMMTLVA 154

Query: 218 TPPNAIALQYLTGENSIDFLSWMMMGLPFVLVQLTIAWFLLQKLFPSSQA 267
           TPPN +    L  E    F  + +  L  V++ L I + L+ +      A
Sbjct: 155 TPPNLVVNSELLREGLHGFNFFSVTPLGVVVLALGIVYMLVMRFMLKGDA 204