Pairwise Alignments

Query, 478 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., Putative membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  111 bits (277), Expect = 5e-29
 Identities = 96/413 (23%), Positives = 188/413 (45%), Gaps = 28/413 (6%)

Query: 66  PVFATSILIIALELVMISDK---GLHGFRVPDPHHPLGELLKYTDIFSAFSSPIIILFMG 122
           P   T ++++   ++ +SD+   GL  F VP   +  G ++   DIF++  +  +IL + 
Sbjct: 3   PAIITLLVLVVAIIIFVSDRLPMGLVAFMVPMALYFTG-VIDAKDIFASIVNANVILIVA 61

Query: 123 GFALAIAASKYELDNNLARVLLKPFGHQPKYIMLGLMLITSVFSMFMSNTATTVMMLALL 182
              L  A  K  L    +++LLK +    + + + + LI  V S F+SN+ T  +++ ++
Sbjct: 62  MCVLGAAFFKTGLAWQSSKILLK-YAKTERSLSVLIFLIGGVMSAFVSNSGTVAVLIPIV 120

Query: 183 GPIVASAPKGDLGIKALVLCIPIA--ANTGGIATPIGTPPNAIALQ----YLTGENSIDF 236
             I AS+      IK + L +P+   A  G   + IG+P N IA      +  G  S+ F
Sbjct: 121 LGIAASSQ-----IKPIKLLMPLVFGATIGADISIIGSPGNLIAKNTIETFSKGSLSVPF 175

Query: 237 LSWMMMGLPFVLVQLTIAWFLLQKLFPSSQATMTLKLKGEFQR--GWRAMLVYITFALTI 294
             +  +G+P ++      +F   KL            + ++ +   W   L    F L+I
Sbjct: 176 FEYAKIGIPLLIACSIFLYFFGSKLIADRDGNTQSDSQMDYSQIPAWHRNLTLAVFILSI 235

Query: 295 VLWMTTSWHGM--NTYVVAIIPLAVFTLTGIMG-KEELKQINWDVLWLVAGGIAIGIGLE 351
              + T +       +++A     V    G++  KE         ++++A  + +G  L 
Sbjct: 236 AGMVATDYIKFLPPMHIIACCAAIVLVFAGVLTQKETFNSFETLTVFMLAFMMPLGAALN 295

Query: 352 QTGLAQALAHSIDYQS--LSPMLIVIALSLVCWLMANFMSNTATANLIMPIAAAIGTSMS 409
            TG  + +A+++   +     M+I+ +L ++ W +   MSNTA   L+ P+   I  S+ 
Sbjct: 296 STGAGEMIANAVISVTGDSGVMIIMASLWILTWALTQVMSNTAACTLLCPVGWTIAQSIG 355

Query: 410 SLEQVGGLQALLVVVAFSASLGMILPVSTPPNSLAYSTGLIESKDMAKTGLVI 462
           +       +A+++ V  ++S+ +  P++   NS+    G ++ KD  K GL I
Sbjct: 356 A-----DPRAVVIAVFIASSVAVCTPMAITANSMIIGPGNVKFKDFLKPGLAI 403