Pairwise Alignments

Query, 478 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., SLC13 family permease from Erwinia tracheiphila SCR3

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 9/172 (5%)

Query: 291 ALTIVLWMTTSWHGMNTYVVAIIPLAVFTLTGIMGKEELKQINWDVLWLVAGGIAIGIGL 350
           AL + + +T         V+A + +  F    +  +   + I+W  + L+ G +   + L
Sbjct: 426 ALMVAMMLTNEIPNPVAAVIACLLMGKFRCIDM--ESAYRAIHWPSIILIVGMMPFALAL 483

Query: 351 EQTGLAQALAHSIDYQS--LSPMLIVIALSLVCWLMANFMSNTATANLIMPIAAAIGTSM 408
           ++TG  + +   +   +   SP ++++ L ++C  +  F+SNTATA L+ PI  A    M
Sbjct: 484 QKTGGVRLIVDGLMDLAGDKSPHVMLLCLFILCATIGLFISNTATAVLMAPIGIAAAGQM 543

Query: 409 SSLEQVGGLQALLVVVAFSASLGMILPVSTPPNSLAYSTGLIESKDMAKTGL 460
                        +++A +AS   + PVS+P N+L    G     D  K G+
Sbjct: 544 GV-----SPYPFTLIIAVAASAAFMTPVSSPVNTLVLGPGGYRFSDFVKMGV 590



 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 11/157 (7%)

Query: 109 FSAFSSPIIILFMGGFALAIAASKYELDNNLARVLLKPFGHQPKYIML-GLMLITSVFSM 167
           + A   P IIL +G    A+A  K      +   L+   G +  ++ML  L ++ +   +
Sbjct: 462 YRAIHWPSIILIVGMMPFALALQKTGGVRLIVDGLMDLAGDKSPHVMLLCLFILCATIGL 521

Query: 168 FMSNTATTVMMLALLGPIVASAPKGDLGIKALVLCIPIA-ANTGGIATPIGTPPNAIALQ 226
           F+SNTAT V+M       +  A  G +G+      + IA A +    TP+ +P N + L 
Sbjct: 522 FISNTATAVLMAP-----IGIAAAGQMGVSPYPFTLIIAVAASAAFMTPVSSPVNTLVL- 575

Query: 227 YLTGENSIDFLSWMMMGLPFVLVQLTIAWFLLQKLFP 263
              G     F  ++ MG+PF ++ + ++  L+   FP
Sbjct: 576 ---GPGGYRFSDFVKMGVPFTILIMVVSVMLVPLFFP 609



 Score = 46.2 bits (108), Expect = 3e-09
 Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 17/199 (8%)

Query: 285 LVYITFALTIVLWMTTSWHGMNTYVVAIIPLAVFTLTGIMGKEELKQINWDV-LWLVAGG 343
           L+++   L+ V+ +  S   +   VVA++ +  F L+G +  +E      D  + L+A  
Sbjct: 5   LIWVLSLLSFVIMLFISGK-LRMDVVALLVIIAFVLSGTLTLQESTAGFSDPNVILIAAL 63

Query: 344 IAIGIGLEQTGLAQALAH-SIDYQSLSPMLIVIALSLVCWLMANFMSNTATANLIMPIAA 402
             IG GL +TG+A  +    I     S   ++I L +    +  FMS+T    + +P+  
Sbjct: 64  FVIGEGLVRTGVALKMGEWLIKMAGSSETKMLILLMVTVAGLGAFMSSTGVVAIFIPVVM 123

Query: 403 AIGTSMSSLEQVGGLQALLVVVAFSASL-GMILPVSTPPNSLAYS----TGLIESK--DM 455
           ++   M +         L++ ++F+  + GM+  V+TPPN +  S     GL   +  D+
Sbjct: 124 SVAARMKT-----SPGRLMMPLSFAGLISGMMTLVATPPNLVVNSELLRAGLAGFRFFDV 178

Query: 456 AKTGLVIGGIGLGIVYLMV 474
              GL+   + LGI Y++V
Sbjct: 179 TPVGLI--ALILGIGYMLV 195



 Score = 37.7 bits (86), Expect = 1e-06
 Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 5/154 (3%)

Query: 110 SAFSSPIIILFMGGFALAIAASKYELDNNLARVLLKPFGHQPKYIMLGLMLITSVFSMFM 169
           + FS P +IL    F +     +  +   +   L+K  G     +++ LM+  +    FM
Sbjct: 50  AGFSDPNVILIAALFVIGEGLVRTGVALKMGEWLIKMAGSSETKMLILLMVTVAGLGAFM 109

Query: 170 SNTATTVMMLALLGPIVAS-APKGDLGIKALVLCIPIAANTGGIATPIGTPPNAIALQYL 228
           S+T     ++A+  P+V S A +       L++ +  A    G+ T + TPPN +    L
Sbjct: 110 SSTG----VVAIFIPVVMSVAARMKTSPGRLMMPLSFAGLISGMMTLVATPPNLVVNSEL 165

Query: 229 TGENSIDFLSWMMMGLPFVLVQLTIAWFLLQKLF 262
                  F  + +  +  + + L I + L+ + +
Sbjct: 166 LRAGLAGFRFFDVTPVGLIALILGIGYMLVARFW 199