Pairwise Alignments

Query, 478 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., Di- and tricarboxylate transporters from Enterobacter asburiae PDN3

 Score = 62.4 bits (150), Expect = 4e-14
 Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 14/156 (8%)

Query: 314 PLAVFTLTGIMGK-------EELKQINWDVLWLVAGGIAIGIGLEQTGLAQALAHSIDYQ 366
           P+A      +MGK          K I+W  + L+ G +   + L++TG    +   +   
Sbjct: 440 PVAAIIACLLMGKFRCIDAESAYKAIHWPSIILIVGMMPFALALQKTGGVDLIVKGLMDV 499

Query: 367 S--LSPMLIVIALSLVCWLMANFMSNTATANLIMPIAAAIGTSMSSLEQVGGLQALLVVV 424
                P ++++ L ++C  +  F+SNTATA L+ PIA A+  SM             ++V
Sbjct: 500 GGGYGPYMMLVCLFIMCATIGLFISNTATAVLMAPIALAMAKSMGV-----SPYPFAMMV 554

Query: 425 AFSASLGMILPVSTPPNSLAYSTGLIESKDMAKTGL 460
           A +AS   + PVS+P N+L    G     D  K G+
Sbjct: 555 AMAASAAFMTPVSSPVNTLVLGPGNYRFSDFVKLGV 590



 Score = 58.2 bits (139), Expect = 8e-13
 Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 38/241 (15%)

Query: 29  VLLMPI---DAIPIQDLTLVQHRLLAIFLLAALLWVLE-PVPVFATSILIIALELVMISD 84
           VL MP+   DA P    +   H +  + L+ AL+   E P PV A    IIA  L     
Sbjct: 401 VLNMPVEESDASPAH--SQAPHAIFCLVLMVALMLTDEIPNPVAA----IIACLL----- 449

Query: 85  KGLHGFRVPDPHHPLGELLKYTDIFSAFSSPIIILFMGGFALAIAASKYELDNNLARVLL 144
             +  FR  D              + A   P IIL +G    A+A  K    + + + L+
Sbjct: 450 --MGKFRCIDAE----------SAYKAIHWPSIILIVGMMPFALALQKTGGVDLIVKGLM 497

Query: 145 KPFGHQPKYIMLG-LMLITSVFSMFMSNTATTVMMLALLGPIVASAPKGDLGIKALVLCI 203
              G    Y+ML  L ++ +   +F+SNTAT V+M     PI  +  K  +G+      +
Sbjct: 498 DVGGGYGPYMMLVCLFIMCATIGLFISNTATAVLM----APIALAMAK-SMGVSPYPFAM 552

Query: 204 PIA-ANTGGIATPIGTPPNAIALQYLTGENSIDFLSWMMMGLPFVLVQLTIAWFLLQKLF 262
            +A A +    TP+ +P N + L    G  +  F  ++ +G+PF ++ + +   L+  LF
Sbjct: 553 MVAMAASAAFMTPVSSPVNTLVL----GPGNYRFSDFVKLGVPFTVLVMVVCVVLIPVLF 608

Query: 263 P 263
           P
Sbjct: 609 P 609



 Score = 50.8 bits (120), Expect = 1e-10
 Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 38/239 (15%)

Query: 49  LLAIFLLAALLWVLEPVPVFATSILIIALELVMISDKGLHGFRVPDPHHPLGELLKYTDI 108
           +L++ L+A LL+    V + A ++ +I   +                   L   L   + 
Sbjct: 8   VLSLLLIAILLFATGKVRMDAVALFVIVAFV-------------------LSGTLTLPEA 48

Query: 109 FSAFSSPIIILFMGGFALAIAASKYELDNNLARVLLKPFGHQPKYIMLGLMLITSVFSMF 168
           FS FS P +IL    F +     +  +   +   L+K  G     +++ LM+  +    F
Sbjct: 49  FSGFSDPNVILIAALFIIGDGLVRTGVATIMGSWLVKVAGSSETKMLIYLMVTVAGLGAF 108

Query: 169 MSNTATTVMMLALLGPIVAS-APKGDLGIKALVLCIPIAANTGGIATPIGTPPNAIALQY 227
           MS+T     ++A+  P+V S + +  +    L++ +  A    G+ T + TPPN +    
Sbjct: 109 MSSTG----VVAIFIPVVLSVSMRMQISPSRLMMPLSFAGLISGMMTLVATPPNLVVNSE 164

Query: 228 LTGENSIDFLSWMMMGLPFVLVQLTIAWFLLQKLFPSSQATMTLKLKGEFQ----RGWR 282
           L  E    F  + +  L  V++ L + + LL +            LKGE Q     GW+
Sbjct: 165 LIREGFQGFSFFSVTPLGLVILVLGVVYMLLTR----------FALKGEKQDKNKEGWK 213



 Score = 42.0 bits (97), Expect = 6e-08
 Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 18/175 (10%)

Query: 310 VAIIPLAVFTLTGIMG-KEELKQINWDVLWLVAGGIAIGIGLEQTGLAQALAH---SIDY 365
           VA+  +  F L+G +   E     +   + L+A    IG GL +TG+A  +      +  
Sbjct: 29  VALFVIVAFVLSGTLTLPEAFSGFSDPNVILIAALFIIGDGLVRTGVATIMGSWLVKVAG 88

Query: 366 QSLSPMLIVIALSLVCWLMANFMSNTATANLIMPIAAAIGTSMSSLEQVGGLQALLVVVA 425
            S + MLI + +++    +  FMS+T    + +P+  ++   M    Q+   + ++ +  
Sbjct: 89  SSETKMLIYLMVTVAG--LGAFMSSTGVVAIFIPVVLSVSMRM----QISPSRLMMPLSF 142

Query: 426 FSASLGMILPVSTPPNSLAYSTGLIES------KDMAKTGLVIGGIGLGIVYLMV 474
                GM+  V+TPPN +  S  + E         +   GLVI  + LG+VY+++
Sbjct: 143 AGLISGMMTLVATPPNLVVNSELIREGFQGFSFFSVTPLGLVI--LVLGVVYMLL 195