Pairwise Alignments

Query, 242 a.a., TetR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  141 bits (355), Expect = 1e-38
 Identities = 73/203 (35%), Positives = 119/203 (58%), Gaps = 1/203 (0%)

Query: 32  MKTKDRIVHAALELFNQQGERNITTNHIAAHIEISPGNLYYHFRNKQEIVRDIFALYSAE 91
           +KT +RIV  +LELFNQQGER+++TNHIAAH+EISPGNLYYHF NKQ I+  +F+ Y A 
Sbjct: 5   IKTSERIVQNSLELFNQQGERSVSTNHIAAHMEISPGNLYYHFPNKQAIIAVLFSEYEAL 64

Query: 92  LIERFTPLQGQYESLSLLKHYLDSIFTLMWKYRFFYANLPEILQRDEELHADYIRVQERL 151
           +     P QG+  ++   + YL  + + MW+YRF + +L  +L  D EL A Y R  +R 
Sbjct: 65  VDSFLRPPQGRPATVEDKRFYLKELLSAMWRYRFLHRDLEHLLDSDAELAARYRRFSQRC 124

Query: 152 QTNLIDIVRNFVNLQLLELNEDEMPKLVRTLHLIASSWLGYQ-SAMSHKTQITEEVIHQG 210
                 I   FV   +L+++  ++  L     +I +SW+ +  +   +   ++E+ + +G
Sbjct: 125 VIQGAAIYEGFVAAGILKMDRVQIESLTLNAWIILTSWVRFLCTTRENSNHLSEQAVKRG 184

Query: 211 MLQMISVVKPCATKAGREQLQLL 233
           + Q++ +     T   R+++  L
Sbjct: 185 VYQVLVLEAGFVTDQARDEVNAL 207