Pairwise Alignments

Query, 242 a.a., TetR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 52.4 bits (124), Expect = 7e-12
 Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 25  RKTKRIMMKTKDRIVHAALELFNQQGERNITTNHIAAHIEISPGNLYYHFRNKQEIVRDI 84
           RKTK+  ++T+  I+  AL LF+QQG    +   IA    ++ G +Y+HF+NK ++  +I
Sbjct: 3   RKTKQQALETRQHILDVALRLFSQQGVSATSLAEIANAAGVTRGAIYWHFKNKSDLFSEI 62

Query: 85  FALYSAELIERFTPLQGQY--ESLSLLKHYL 113
           + L  + + E     Q ++  + LS+L+  L
Sbjct: 63  WELSESNIGELEIEYQAKFPDDPLSVLREIL 93