Pairwise Alignments

Query, 164 a.a., Rsd/AlgQ family anti-sigma factor from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., sigma D regulator from Escherichia coli ECRC100

 Score =  100 bits (249), Expect = 1e-26
 Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)

Query: 3   MLRKFKNVQEQWGGSSDIIDHWLDKRQHVIVEYCKLAALQPCTTKAAVSELPSPQALLYF 62
           ML +  N+ E+  GS+ ++D WL  R+H++V Y  L  ++P   K +   L + +AL  F
Sbjct: 1   MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKP--GKESYMRL-NEKALDDF 57

Query: 63  CQELVDYISEGHFKIYDMVMDKWHATGFKATDEINQVYGKIVATTEPLLNFNDQ-YATVT 121
           CQ LVDY+S GHF IY+ ++ K    G  A     +++ ++ A T+ ++++ D    T  
Sbjct: 58  CQSLVDYLSAGHFSIYERILHKLEGNGQLA--RAAKIWPQLEANTQQIMDYYDSSLETAI 115

Query: 122 EYDELLDLDRDLSKVGEVLELRFSLEDQLIQLIADSLAV 160
           ++D  L+  + LS +GE LE RF LED+LI L+ D+  V
Sbjct: 116 DHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARV 154