Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 203 a.a., transcription termination/antitermination protein NusG from Variovorax sp. OAS795

 Score =  231 bits (588), Expect = 8e-66
 Identities = 108/176 (61%), Positives = 138/176 (78%)

Query: 5   PKKRWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRAGQRRKSERKF 64
           P  RWYVV A+SG E  V +++ E I   GM++ FG +LVPTEEVVE++ GQ+R +ER+F
Sbjct: 27  PDLRWYVVHAYSGMEKAVERNITERINRAGMQDKFGRILVPTEEVVEIKNGQKRTTERRF 86

Query: 65  FPGYVLVQMIMNDESWHLVRSVPRVMGFIGGTSDRPAPITDKEADAILNRLEKASEAPRP 124
           FPGYVLV+MIM+DESWHLV+   +V GF+GG  +RPAPI+ KE + I+N++++ +E PR 
Sbjct: 87  FPGYVLVEMIMDDESWHLVKHTNKVTGFVGGAKNRPAPISQKEVEDIVNQMQQGTEKPRH 146

Query: 125 KTMFEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFGQVEK 180
           K  F  GE VRV +GPF DFNGTVEEV+YEKS++ VSV IFGRATPVELEF QVEK
Sbjct: 147 KVEFTVGEFVRVKEGPFTDFNGTVEEVNYEKSKVSVSVMIFGRATPVELEFSQVEK 202