Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 178 a.a., Transcription antitermination protein NusG from Sphingobium sp. HT1-2

 Score =  177 bits (449), Expect = 9e-50
 Identities = 87/174 (50%), Positives = 126/174 (72%), Gaps = 3/174 (1%)

Query: 8   RWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRAGQRRKSERKFFPG 67
           RWY++ A+SGFE +V +S+    +  G+ +L  +V VPTE V E++ G++ + ERKF PG
Sbjct: 3   RWYIIHAYSGFENKVKESILTEAERMGLSQLVEQVEVPTETVTEVKRGKKVQVERKFMPG 62

Query: 68  YVLVQMIMNDESWHLVRSVPRVMGFIGGTSDRPAPITDKEADAILNRLEKASEAPRPKTM 127
           YVL ++ MND+ +HLV++ P+V GF+ G+S +P  I++ EA       ++A+ AP+ K  
Sbjct: 63  YVLAKLAMNDDVYHLVKNTPKVTGFL-GSSGKPQAISESEAARYFGAQKEAAAAPKHKVN 121

Query: 128 --FEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFGQVE 179
             +E G+ V+V DGPFA FNG VEE+D+EK+R+KVSVSIFGRATPVEL+F QVE
Sbjct: 122 VDYEIGDSVKVLDGPFASFNGVVEELDFEKNRVKVSVSIFGRATPVELDFEQVE 175