Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., transcriptional activator RfaH from Kangiella aquimarina DSM 16071

 Score = 70.1 bits (170), Expect = 2e-17
 Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 21/178 (11%)

Query: 7   KRWYVVQAFSGFEGRVAQSLR--EHIKMHGMEELFGEVLVPTEEVVEMRAGQRRKSERKF 64
           K WY+V +      +  Q LR  EH+K   +       ++P  E+ ++  G+R+      
Sbjct: 6   KGWYLVHS------KPRQELRAEEHLKNQAIN-----CVLPLIEIEKIIRGKRQLISEPL 54

Query: 65  FPGYVLVQMIMNDESWHLVRSVPRVMGFI--GGTSDRPAPITDKEADAILNRLEKASEAP 122
           FPGY+ V++  N + W  +RS   V  F+  GG   R  P +  E   IL   + A E  
Sbjct: 55  FPGYLFVELQTNGQDWSKIRSTRGVRDFVRFGGVPGR-VPESVLEHLKILEIRDAAIETN 113

Query: 123 RPKTMFEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFGQVEK 180
            PK    AG+ V + DGPF D  G V ++   + R  V ++I G+AT +ELE  ++ K
Sbjct: 114 APK----AGDKVVITDGPFKDLEG-VFKISNGEERSIVLLTILGKATEMELENNKLRK 166