Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., Transcription antiterminator from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 48.9 bits (115), Expect = 5e-11
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 16/144 (11%)

Query: 5   PKKRWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRAGQRRKSERKF 64
           P+  WYV+      E RVAQ L         EE      +P  E V   + +++K +R  
Sbjct: 3   PESNWYVMYTAPRAEKRVAQRL---------EEKGVTAYLPMIEEVRQWSDRKKKVKRPL 53

Query: 65  FPGYVLVQMIMNDES--WHLVRSVPRVMGFIGGTSDRPAPITDKEADAILNRLEKASEAP 122
           F GY+ V+   +D+S  W  ++ V   + F+  + D  A + D E +AI   +E      
Sbjct: 54  FNGYIFVR---SDKSRLWEALQ-VQGAVKFVNFSGDH-AVVRDSEIEAIKRIVETGVAVE 108

Query: 123 RPKTMFEAGEVVRVNDGPFADFNG 146
              T  E G+ V++  GP   F G
Sbjct: 109 VETTHIEEGQQVKIIGGPLQGFEG 132